CArG-box site | CArG-box and its flanking sequences (5' to 3')1) | Motif (strand)2) | CArG-box position (bps)3) |
---|---|---|---|
009F | CCTAAATA- CTATTATAAG -AATGATCA | Possible (+, -) | scaffold01172 (3,039,503 - 3,039,512) |
016 | GTACAGCA- CCAAAATTGG -CGACCACA | SRF-like (+, -) | scaffold01172 (4,647,499 - 4,647,508) |
027R | AACTCTCC- CCTATATTGG -TGCTCAAT | SRF-like (+, -) | scaffold00008 (1,340,392 - 1,340,401) |
042F | GATAGATC- CTAATTTTGG -TAAGTGAC | Possible (+), Intermediate (-) | scaffold00077 (3,770,305 - 3,770,314) |
046F_1 | CTTTTGGG- CTTAATTTAG -GGATTTAC | Possible (+, -) | scaffold00162 (1,604,081 - 1,604,090) |
046F_2 | ACATTTTT- CCATATTTAG -TACTAGAT | Intermediate (+), Possible (-) | scaffold00162 (1,604,514 - 1,604,523) |
066F | ACTAGCAA- CTATTATAGG -GCCCTCCT | Possible (+), Intermediate (-) | scaffold00041 (5,908,092 - 5,908,101) |
073F | AAAGTCCC- CTTTTTTTGG -AAAAATAC | Possible (+, -) | scaffold00885 (1,175,686 - 1,175,695) |
090R | TATATTGT- CTATTATAGG -GGACGGTC | Possible (+), Intermediate (-) | scaffold00235 (679,848 - 679,857) |
100_1 | GCTGGATT- CTATTATAAG -GACATCAT | Possible (+, -) | scaffold00073 (9,132 - 9,141) |
100_2 | GCCAGATT- CCTATATTAG -CAGTATAG | Intermediate (+), Possible (-) | scaffold00073 (8,936 - 8,945) |
128R | CTTCATAC- CTTAATTAAG -CAACCTTA | Possible (+, -) | scaffold00183 (1,735,586 - 1,735,595) |
133R | AGAAAATG- CCATTTTTGG -AAGGAAGA | SRF-like (+, -) | scaffold00103 (1,409,234 - 1,409,243) |