Site | CArG-box and its flanking sequences (5' to 3')1) | Motif 2) | CArG-box position (bps)3) |
---|---|---|---|
ACS2-a4) | AGCTATT- CTAAAAAAAG -TATCACATA5) | Possible | X59139 (1,365 - 1,374) (+) |
ACS2-b | AAATGCAC- CCTAAATTAG -TCAAATAT5) | Possible | X59139 (2,654 - 2,663) (+) |
ACS4-a | ATCAAACA- CAAATATAAG -TTTGGAAC5) | Atypical | M88487 (567 - 576) (+) |
ACS4-b | ATTAAACA- CAATTTTAAG -AAACTTTT5) | Atypical | M88487 (1,201 - 1,210) (+) |
ACS4-c | TGAAATAT- CTAGTTAAAG -ATATGTAC5) | Atypical | M88487 (1,802 - 1,811) (+) |
ACO1 | GGTTGAAT- CTATAAAAAG -AAAAATAT | Possible | X58273 (1,285 - 1,294) (+) |
ETR3-a | GGAGAAAT- CCTATAATAG -GGCAAACA | Intermediate | AY600437 (3,121 - 3,130) (+) |
 | GAGAAATC- CTATAATAGG -GCAAACAC | Possible | AY600437 (3,122 - 3,131) (+) |
 | GGCAAACA- CCAAAAATAG -CTTGGAGT | Intermediate | AY600437 (3,139 - 3,148) (+) |
ETR3-b | AAATTTCA- CTTAATATGG -ACTAGAGA | Possible | AY600437 (3,745 - 3,754) (+) |
PG-a | GCACCAAT- CTAATTTAGG -TTGAGCCG | Possible | scaffold01076 (1,534,540 - 1,534,549) (-) |
PG-b | CTTAAAAT- CTATAAATAG -ACAAACCC | MEF2-like | scaffold01076 (1,533,632 - 1,533,641) (-) |
TBG4-a | TATATGCT- CTATTTTTGG -ACGGCAGG5) | Possible | scaffold00061 (457,025 - 457,034) (+) |
TBG4-b | TTTGGGCC- CCATTTAAGG -GATTGGGC5) | SRF-like | scaffold00061 (457,311 - 457,320) (+) |
EXP1-a | TTATTTTA- CATTTATATG -TTATTATT | Atypical | scaffold00114 (3,118,161 - 3,118,170) (-) |
EXP1-b | TGATGCTT- CAATTTAAAG -AAAATAAA5) | Atypical | scaffold00114 (3,117,729 - 3,117,738) (-) |
MAN4 | TTTCTTTT- CCATTTATAG -AAAAACCA5) | Intermediate | scaffold01157 (9,316,653 - 9,316,662) (-) |
PSY1 | TATGTGTA- CCAAAATTAG -AAAATCAG | Intermediate | scaffold00066 (364,464 - 364,473) (+) |
 | CTTGTTGA- CTAAATATAG -AATGCATC | MEF2-like | scaffold00066 (364,504 - 364,513) (+) |
INV | TTATGATA- CTTAATATGG -TAATCTTT | Possible | Z12027 (1,634 - 1,643) (+) |
 | TTCTCACT- CTATAAATAG -AGTTGTTC | MEF2-like | Z12027 (1,667 - 1,676) (+) |
RIN-a | GTTGCACT- CTAAAAAAAG -TTAAAAGG5) | Possible | scaffold00243 (210,835 - 210,844) (-) |
RIN-b | ACAAAGAA- CCATTAAAAG -GTTAAAAA5) | Intermediate | scaffold00243 (210,262 - 210,271) (-) |