TY - JOUR AU - Prasanna, V. AU - Prabha, T. N. AU - Tharanathan, R. N. PY - 2007 DA - 2007// TI - Fruit ripening phenomena--an overview JO - Crit Rev Food Sci Nutr VL - 47 UR - https://doi.org/10.1080/10408390600976841 DO - 10.1080/10408390600976841 ID - Prasanna2007 ER - TY - JOUR AU - Giovannoni, J. PY - 2001 DA - 2001// TI - Molecular biology of fruit maturation and ripening JO - Annu Rev Plant Physiol Plant Mol Biol VL - 52 UR - https://doi.org/10.1146/annurev.arplant.52.1.725 DO - 10.1146/annurev.arplant.52.1.725 ID - Giovannoni2001 ER - TY - JOUR AU - Moore, S. AU - Vrebalov, J. AU - Payton, P. AU - Giovannoni, J. PY - 2002 DA - 2002// TI - Use of genomics tools to isolate key ripening genes and analyse fruit maturation in tomato JO - J Exp Bot VL - 53 UR - https://doi.org/10.1093/jxb/erf057 DO - 10.1093/jxb/erf057 ID - Moore2002 ER - TY - JOUR AU - Tigchelaar, E. AU - McGlasson, W. AU - Buescher, R. PY - 1978 DA - 1978// TI - Genetic regulation of tomato fruit ripening JO - HortScience VL - 13 ID - Tigchelaar1978 ER - TY - JOUR AU - Vrebalov, J. AU - Ruezinsky, D. AU - Padmanabhan, V. AU - White, R. AU - Medrano, D. AU - Drake, R. AU - Schuch, W. AU - Giovannoni, J. PY - 2002 DA - 2002// TI - A MADS-box gene necessary for fruit ripening at the tomato ripening-inhibitor (rin) locus JO - Science VL - 296 UR - https://doi.org/10.1126/science.1068181 DO - 10.1126/science.1068181 ID - Vrebalov2002 ER - TY - JOUR AU - Ito, Y. AU - Kitagawa, M. AU - Ihashi, N. AU - Yabe, K. AU - Kimbara, J. AU - Yasuda, J. AU - Ito, H. AU - Inakuma, T. AU - Hiroi, S. AU - Kasumi, T. PY - 2008 DA - 2008// TI - DNA-binding specificity, transcriptional activation potential, and the rin mutation effect for the tomato fruit-ripening regulator RIN JO - Plant J VL - 55 UR - https://doi.org/10.1111/j.1365-313X.2008.03491.x DO - 10.1111/j.1365-313X.2008.03491.x ID - Ito2008 ER - TY - JOUR AU - Nakatsuka, A. AU - Murachi, S. AU - Okunishi, H. AU - Shiomi, S. AU - Nakano, R. AU - Kubo, Y. AU - Inaba, A. PY - 1998 DA - 1998// TI - Differential expression and internal feedback regulation of 1-aminocyclopropane-1-carboxylate synthase, 1-aminocyclopropane-1-carboxylate oxidase, and ethylene receptor genes in tomato fruit during development and ripening JO - Plant Physiol VL - 118 UR - https://doi.org/10.1104/pp.118.4.1295 DO - 10.1104/pp.118.4.1295 ID - Nakatsuka1998 ER - TY - JOUR AU - Barry, C. S. AU - Llop-Tous, M. I. AU - Grierson, D. PY - 2000 DA - 2000// TI - The regulation of 1-aminocyclopropane-1-carboxylic acid synthase gene expression during the transition from system-1 to system-2 ethylene synthesis in tomato JO - Plant Physiol VL - 123 UR - https://doi.org/10.1104/pp.123.3.979 DO - 10.1104/pp.123.3.979 ID - Barry2000 ER - TY - JOUR AU - Yokotani, N. AU - Nakano, R. AU - Imanishi, S. AU - Nagata, M. AU - Inaba, A. AU - Kubo, Y. PY - 2009 DA - 2009// TI - Ripening-associated ethylene biosynthesis in tomato fruit is autocatalytically and developmentally regulated JO - J Exp Bot VL - 60 UR - https://doi.org/10.1093/jxb/erp185 DO - 10.1093/jxb/erp185 ID - Yokotani2009 ER - TY - JOUR AU - Smith, C. J. AU - Watson, C. F. AU - Morris, P. C. AU - Bird, C. R. AU - Seymour, G. B. AU - Gray, J. E. AU - Arnold, C. AU - Tucker, G. A. AU - Schuch, W. AU - Harding, S. PY - 1990 DA - 1990// TI - Inheritance and effect on ripening of antisense polygalacturonase genes in transgenic tomatoes JO - Plant Mol Biol VL - 14 UR - https://doi.org/10.1007/BF00028773 DO - 10.1007/BF00028773 ID - Smith1990 ER - TY - JOUR AU - Smith, C. J. S. AU - Watson, C. F. AU - Ray, J. AU - Bird, C. R. AU - Morris, P. C. AU - Schuch, W. AU - Grierson, D. PY - 1988 DA - 1988// TI - Antisense RNA inhibition of polygalacturonase gene-expression in transgenic tomatoes JO - Nature VL - 334 UR - https://doi.org/10.1038/334724a0 DO - 10.1038/334724a0 ID - Smith1988 ER - TY - JOUR AU - Smith, D. L. AU - Abbott, J. A. AU - Gross, K. C. PY - 2002 DA - 2002// TI - Down-regulation of tomato β-galactosidase 4 results in decreased fruit softening JO - Plant Physiol VL - 129 UR - https://doi.org/10.1104/pp.011025 DO - 10.1104/pp.011025 ID - Smith2002 ER - TY - JOUR AU - Smith, D. L. AU - Starrett, D. A. AU - Gross, K. C. PY - 1998 DA - 1998// TI - A gene coding for tomato fruit β-galactosidase II is expressed during fruit ripening. Cloning, characterization, and expression pattern JO - Plant Physiol VL - 117 UR - https://doi.org/10.1104/pp.117.2.417 DO - 10.1104/pp.117.2.417 ID - Smith1998 ER - TY - JOUR AU - Carrington, C. M. S. AU - Vendrell, M. AU - Dominguez-Puigjaner, E. PY - 2002 DA - 2002// TI - Characterisation of an endo-(1,4)-β-mannanase (LeMAN4) expressed in ripening tomato fruit JO - Plant Sci VL - 163 UR - https://doi.org/10.1016/S0168-9452(02)00167-X DO - 10.1016/S0168-9452(02)00167-X ID - Carrington2002 ER - TY - JOUR AU - Wang, A. AU - Li, J. AU - Zhang, B. AU - Xu, X. AU - Bewley, J. D. PY - 2009 DA - 2009// TI - Expression and location of endo-β-mannanase during the ripening of tomato fruit, and the relationship between its activity and softening JO - J Plant Physiol VL - 166 UR - https://doi.org/10.1016/j.jplph.2009.04.008 DO - 10.1016/j.jplph.2009.04.008 ID - Wang2009 ER - TY - JOUR AU - Brummell, D. A. AU - Harpster, M. H. AU - Civello, P. M. AU - Palys, J. M. AU - Bennett, A. B. AU - Dunsmuir, P. PY - 1999 DA - 1999// TI - Modification of expansin protein abundance in tomato fruit alters softening and cell wall polymer metabolism during ripening JO - Plant Cell VL - 11 UR - https://doi.org/10.1105/tpc.11.11.2203 DO - 10.1105/tpc.11.11.2203 ID - Brummell1999 ER - TY - JOUR AU - Brummell, D. A. AU - Harpster, M. H. AU - Dunsmuir, P. PY - 1999 DA - 1999// TI - Differential expression of expansin gene family members during growth and ripening of tomato fruit JO - Plant Mol Biol VL - 39 UR - https://doi.org/10.1023/A:1006130018931 DO - 10.1023/A:1006130018931 ID - Brummell1999 ER - TY - JOUR AU - Cosgrove, D. J. AU - Bedinger, P. AU - Durachko, D. M. PY - 1997 DA - 1997// TI - Group I allergens of grass pollen as cell wall-loosening agents JO - Proc Natl Acad Sci USA VL - 94 UR - https://doi.org/10.1073/pnas.94.12.6559 DO - 10.1073/pnas.94.12.6559 ID - Cosgrove1997 ER - TY - JOUR AU - Rose, J. K. AU - Lee, H. H. AU - Bennett, A. B. PY - 1997 DA - 1997// TI - Expression of a divergent expansin gene is fruit-specific and ripening-regulated JO - Proc Natl Acad Sci USA VL - 94 UR - https://doi.org/10.1073/pnas.94.11.5955 DO - 10.1073/pnas.94.11.5955 ID - Rose1997 ER - TY - JOUR AU - Bartley, G. E. AU - Viitanen, P. V. AU - Bacot, K. O. AU - Scolnik, P. A. PY - 1992 DA - 1992// TI - A tomato gene expressed during fruit ripening encodes an enzyme of the carotenoid biosynthesis pathway JO - J Biol Chem VL - 267 ID - Bartley1992 ER - TY - JOUR AU - Fray, R. G. AU - Grierson, D. PY - 1993 DA - 1993// TI - Identification and genetic analysis of normal and mutant phytoene synthase genes of tomato by sequencing, complementation and co-suppression JO - Plant Mol Biol VL - 22 UR - https://doi.org/10.1007/BF00047400 DO - 10.1007/BF00047400 ID - Fray1993 ER - TY - JOUR AU - Elliott, K. J. AU - Butler, W. O. AU - Dickinson, C. D. AU - Konno, Y. AU - Vedvick, T. S. AU - Fitzmaurice, L. AU - Mirkov, T. E. PY - 1993 DA - 1993// TI - Isolation and characterization of fruit vacuolar invertase genes from two tomato species and temporal differences in mRNA levels during fruit ripening JO - Plant Mol Biol VL - 21 UR - https://doi.org/10.1007/BF00028808 DO - 10.1007/BF00028808 ID - Elliott1993 ER - TY - JOUR AU - Kitagawa, M. AU - Moriyama, T. AU - Ito, H. AU - Ozasa, S. AU - Adachi, A. AU - Yasuda, J. AU - Ookura, T. AU - Inakuma, T. AU - Kasumi, T. AU - Ishiguro, Y. PY - 2006 DA - 2006// TI - Reduction of allergenic proteins by the effect of the ripening inhibitor (rin) mutant gene in an F1 hybrid of the rin mutant tomato JO - Biosci Biotechnol Biochem VL - 70 UR - https://doi.org/10.1271/bbb.70.1227 DO - 10.1271/bbb.70.1227 ID - Kitagawa2006 ER - TY - JOUR AU - Hecht, A. AU - Grunstein, M. PY - 1999 DA - 1999// TI - Mapping DNA interaction sites of chromosomal proteins using immunoprecipitation and polymerase chain reaction JO - Methods Enzymol VL - 304 UR - https://doi.org/10.1016/S0076-6879(99)04024-0 DO - 10.1016/S0076-6879(99)04024-0 ID - Hecht1999 ER - TY - JOUR AU - Gomez-Mena, C. AU - de Folter, S. AU - Costa, M. M. AU - Angenent, G. C. AU - Sablowski, R. PY - 2005 DA - 2005// TI - Transcriptional program controlled by the floral homeotic gene AGAMOUS during early organogenesis JO - Development VL - 132 UR - https://doi.org/10.1242/dev.01600 DO - 10.1242/dev.01600 ID - Gomez-Mena2005 ER - TY - JOUR AU - Zheng, Y. AU - Ren, N. AU - Wang, H. AU - Stromberg, A. J. AU - Perry, S. E. PY - 2009 DA - 2009// TI - Global identification of targets of the Arabidopsis MADS domain protein AGAMOUS-Like15 JO - Plant Cell VL - 21 UR - https://doi.org/10.1105/tpc.109.068890 DO - 10.1105/tpc.109.068890 ID - Zheng2009 ER - TY - JOUR AU - Kaufmann, K. AU - Muino, J. M. AU - Jauregui, R. AU - Airoldi, C. A. AU - Smaczniak, C. AU - Krajewski, P. AU - Angenent, G. C. PY - 2009 DA - 2009// TI - Target genes of the MADS transcription factor SEPALLATA3: integration of developmental and hormonal pathways in the Arabidopsis flower JO - PLoS Biol VL - 7 UR - https://doi.org/10.1371/journal.pbio.1000090 DO - 10.1371/journal.pbio.1000090 ID - Kaufmann2009 ER - TY - JOUR AU - Bourgault, R. AU - Bewley, J. D. PY - 2002 DA - 2002// TI - Variation in its C-terminal amino acids determines whether endo-β-mannanase is active or inactive in ripening tomato fruits of different cultivars JO - Plant Physiol VL - 130 UR - https://doi.org/10.1104/pp.011890 DO - 10.1104/pp.011890 ID - Bourgault2002 ER - TY - JOUR AU - Kitagawa, M. AU - Ito, H. AU - Shiina, T. AU - Nakamura, N. AU - Inakuma, T. AU - Kasumi, T. AU - Ishiguro, Y. AU - Yabe, K. AU - Ito, Y. PY - 2005 DA - 2005// TI - Characterization of tomato fruit ripening and analysis of gene expression in F-1 hybrids of the ripening inhibitor (rin) mutant JO - Physiol Plantarum VL - 123 UR - https://doi.org/10.1111/j.1399-3054.2005.00460.x DO - 10.1111/j.1399-3054.2005.00460.x ID - Kitagawa2005 ER - TY - JOUR AU - Treisman, R. PY - 1986 DA - 1986// TI - Identification of a protein-binding site that mediates transcriptional response of the c-fos gene to serum factors JO - Cell VL - 46 UR - https://doi.org/10.1016/0092-8674(86)90882-2 DO - 10.1016/0092-8674(86)90882-2 ID - Treisman1986 ER - TY - JOUR AU - Pollock, R. AU - Treisman, R. PY - 1991 DA - 1991// TI - Human SRF-related proteins: DNA-binding properties and potential regulatory targets JO - Genes Dev VL - 5 UR - https://doi.org/10.1101/gad.5.12a.2327 DO - 10.1101/gad.5.12a.2327 ID - Pollock1991 ER - TY - JOUR AU - Vrebalov, J. AU - Pan, I. L. AU - Arroyo, A. J. AU - McQuinn, R. AU - Chung, M. AU - Poole, M. AU - Rose, J. AU - Seymour, G. AU - Grandillo, S. AU - Giovannoni, J. PY - 2009 DA - 2009// TI - Fleshy fruit expansion and ripening are regulated by the Tomato SHATTERPROOF gene TAGL1 JO - Plant Cell VL - 21 UR - https://doi.org/10.1105/tpc.109.066936 DO - 10.1105/tpc.109.066936 ID - Vrebalov2009 ER - TY - JOUR AU - Blume, B. AU - Barry, C. S. AU - Hamilton, A. J. AU - Bouzayen, M. AU - Grierson, D. PY - 1997 DA - 1997// TI - Identification of transposon-like elements in non-coding regions of tomato ACC oxidase genes JO - Mol Gen Genet VL - 254 UR - https://doi.org/10.1007/s004380050419 DO - 10.1007/s004380050419 ID - Blume1997 ER - TY - JOUR AU - Theissen, G. AU - Saedler, H. PY - 2001 DA - 2001// TI - Plant biology. Floral quartets JO - Nature VL - 409 UR - https://doi.org/10.1038/35054172 DO - 10.1038/35054172 ID - Theissen2001 ER - TY - JOUR AU - de Folter, S. AU - Shchennikova, A. V. AU - Franken, J. AU - Busscher, M. AU - Baskar, R. AU - Grossniklaus, U. AU - Angenent, G. C. AU - Immink, R. G. PY - 2006 DA - 2006// TI - A Bsister MADS-box gene involved in ovule and seed development in petunia and Arabidopsis JO - Plant J VL - 47 UR - https://doi.org/10.1111/j.1365-313X.2006.02846.x DO - 10.1111/j.1365-313X.2006.02846.x ID - de Folter2006 ER - TY - JOUR AU - Egea-Cortines, M. AU - Saedler, H. AU - Sommer, H. PY - 1999 DA - 1999// TI - Ternary complex formation between the MADS-box proteins SQUAMOSA, DEFICIENS and GLOBOSA is involved in the control of floral architecture in Antirrhinum majus JO - EMBO J VL - 18 UR - https://doi.org/10.1093/emboj/18.19.5370 DO - 10.1093/emboj/18.19.5370 ID - Egea-Cortines1999 ER - TY - JOUR AU - Leseberg, C. H. AU - Eissler, C. L. AU - Wang, X. AU - Johns, M. A. AU - Duvall, M. R. AU - Mao, L. PY - 2008 DA - 2008// TI - Interaction study of MADS-domain proteins in tomato JO - J Exp Bot VL - 59 UR - https://doi.org/10.1093/jxb/ern094 DO - 10.1093/jxb/ern094 ID - Leseberg2008 ER - TY - JOUR AU - Hileman, L. C. AU - Sundstrom, J. F. AU - Litt, A. AU - Chen, M. AU - Shumba, T. AU - Irish, V. F. PY - 2006 DA - 2006// TI - Molecular and phylogenetic analyses of the MADS-box gene family in tomato JO - Mol Biol Evol VL - 23 UR - https://doi.org/10.1093/molbev/msl095 DO - 10.1093/molbev/msl095 ID - Hileman2006 ER - TY - JOUR AU - Honma, T. AU - Goto, K. PY - 2001 DA - 2001// TI - Complexes of MADS-box proteins are sufficient to convert leaves into floral organs JO - Nature VL - 409 UR - https://doi.org/10.1038/35054083 DO - 10.1038/35054083 ID - Honma2001 ER - TY - JOUR AU - Goto, K. AU - Meyerowitz, E. M. PY - 1994 DA - 1994// TI - Function and regulation of the Arabidopsis floral homeotic gene PISTILLATA JO - Genes Dev VL - 8 UR - https://doi.org/10.1101/gad.8.13.1548 DO - 10.1101/gad.8.13.1548 ID - Goto1994 ER - TY - JOUR AU - Hill, T. A. AU - Day, C. D. AU - Zondlo, S. C. AU - Thackeray, A. G. AU - Irish, V. F. PY - 1998 DA - 1998// TI - Discrete spatial and temporal cis-acting elements regulate transcription of the Arabidopsis floral homeotic gene APETALA3 JO - Development VL - 125 ID - Hill1998 ER - TY - JOUR AU - Schwarz-Sommer, Z. AU - Hue, I. AU - Huijser, P. AU - Flor, P. J. AU - Hansen, R. AU - Tetens, F. AU - Lonnig, W. E. AU - Saedler, H. AU - Sommer, H. PY - 1992 DA - 1992// TI - Characterization of the Antirrhinum floral homeotic MADS-box gene deficiens: evidence for DNA binding and autoregulation of its persistent expression throughout flower development JO - EMBO J VL - 11 ID - Schwarz-Sommer1992 ER - TY - JOUR AU - Itkin, M. AU - Seybold, H. AU - Breitel, D. AU - Rogachev, I. AU - Meir, S. AU - Aharoni, A. PY - 2009 DA - 2009// TI - TOMATO AGAMOUS-LIKE 1 is a component of the fruit ripening regulatory network JO - Plant J VL - 60 UR - https://doi.org/10.1111/j.1365-313X.2009.04064.x DO - 10.1111/j.1365-313X.2009.04064.x ID - Itkin2009 ER - TY - JOUR AU - Kende, H. PY - 1993 DA - 1993// TI - Ethylene Biosynthesis JO - Annu Rev Plant Phys VL - 44 UR - https://doi.org/10.1146/annurev.pp.44.060193.001435 DO - 10.1146/annurev.pp.44.060193.001435 ID - Kende1993 ER - TY - JOUR AU - Lin, Z. AU - Hong, Y. AU - Yin, M. AU - Li, C. AU - Zhang, K. AU - Grierson, D. PY - 2008 DA - 2008// TI - A tomato HD-Zip homeobox protein, LeHB-1, plays an important role in floral organogenesis and ripening JO - Plant J VL - 55 UR - https://doi.org/10.1111/j.1365-313X.2008.03505.x DO - 10.1111/j.1365-313X.2008.03505.x ID - Lin2008 ER - TY - JOUR AU - Montgomery, J. AU - Pollard, V. AU - Deikman, J. AU - Fischer, R. L. PY - 1993 DA - 1993// TI - Positive and negative regulatory regions control the spatial distribution of polygalacturonase transcription in tomato fruit pericarp JO - Plant Cell VL - 5 UR - https://doi.org/10.1105/tpc.5.9.1049 DO - 10.1105/tpc.5.9.1049 ID - Montgomery1993 ER - TY - JOUR AU - Nicholass, F. J. AU - Smith, C. J. AU - Schuch, W. AU - Bird, C. R. AU - Grierson, D. PY - 1995 DA - 1995// TI - High levels of ripening-specific reporter gene expression directed by tomato fruit polygalacturonase gene-flanking regions JO - Plant Mol Biol VL - 28 UR - https://doi.org/10.1007/BF00020391 DO - 10.1007/BF00020391 ID - Nicholass1995 ER - TY - JOUR AU - Sitrit, Y. AU - Bennett, A. B. PY - 1998 DA - 1998// TI - Regulation of tomato fruit polygalacturonase mRNA accumulation by ethylene: A Re-examination JO - Plant Physiol VL - 116 UR - https://doi.org/10.1104/pp.116.3.1145 DO - 10.1104/pp.116.3.1145 ID - Sitrit1998 ER - TY - JOUR AU - Oeller, P. W. AU - Lu, M. W. AU - Taylor, L. P. AU - Pike, D. A. AU - Theologis, A. PY - 1991 DA - 1991// TI - Reversible inhibition of tomato fruit senescence by antisense RNA JO - Science VL - 254 UR - https://doi.org/10.1126/science.1925603 DO - 10.1126/science.1925603 ID - Oeller1991 ER - TY - JOUR AU - Giovannoni, J. J. AU - DellaPenna, D. AU - Bennett, A. B. AU - Fischer, R. L. PY - 1989 DA - 1989// TI - Expression of a chimeric polygalacturonase gene in transgenic rin (ripening inhibitor) tomato fruit results in polyuronide degradation but not fruit softening JO - Plant Cell VL - 1 UR - https://doi.org/10.1105/tpc.1.1.53 DO - 10.1105/tpc.1.1.53 ID - Giovannoni1989 ER - TY - JOUR AU - Powell, A. L. AU - Kalamaki, M. S. AU - Kurien, P. A. AU - Gurrieri, S. AU - Bennett, A. B. PY - 2003 DA - 2003// TI - Simultaneous transgenic suppression of LePG and LeExp1 influences fruit texture and juice viscosity in a fresh market tomato variety JO - J Agric Food Chem VL - 51 UR - https://doi.org/10.1021/jf034165d DO - 10.1021/jf034165d ID - Powell2003 ER - TY - JOUR AU - Collin, V. AU - Lamkemeyer, P. AU - Miginiac-Maslow, M. AU - Hirasawa, M. AU - Knaff, D. B. AU - Dietz, K. J. AU - Issakidis-Bourguet, E. PY - 2004 DA - 2004// TI - Characterization of plastidial thioredoxins from Arabidopsis belonging to the new y-type JO - Plant Physiol VL - 136 UR - https://doi.org/10.1104/pp.104.052233 DO - 10.1104/pp.104.052233 ID - Collin2004 ER - TY - JOUR AU - Dietz, K. J. AU - Jacob, S. AU - Oelze, M. L. AU - Laxa, M. AU - Tognetti, V. AU - de Miranda, S. M. AU - Baier, M. AU - Finkemeier, I. PY - 2006 DA - 2006// TI - The function of peroxiredoxins in plant organelle redox metabolism JO - J Exp Bot VL - 57 UR - https://doi.org/10.1093/jxb/erj160 DO - 10.1093/jxb/erj160 ID - Dietz2006 ER - TY - JOUR AU - Rey, P. AU - Cuine, S. AU - Eymery, F. AU - Garin, J. AU - Court, M. AU - Jacquot, J. P. AU - Rouhier, N. AU - Broin, M. PY - 2005 DA - 2005// TI - Analysis of the proteins targeted by CDSP32, a plastidic thioredoxin participating in oxidative stress responses JO - Plant J VL - 41 UR - https://doi.org/10.1111/j.1365-313X.2004.02271.x DO - 10.1111/j.1365-313X.2004.02271.x ID - Rey2005 ER - TY - JOUR AU - Lamkemeyer, P. AU - Laxa, M. AU - Collin, V. AU - Li, W. AU - Finkemeier, I. AU - Schottler, M. A. AU - Holtkamp, V. AU - Tognetti, V. B. AU - Issakidis-Bourguet, E. AU - Kandlbinder, A. PY - 2006 DA - 2006// TI - Peroxiredoxin Q of Arabidopsis thaliana is attached to the thylakoids and functions in context of photosynthesis JO - Plant J VL - 45 UR - https://doi.org/10.1111/j.1365-313X.2006.02665.x DO - 10.1111/j.1365-313X.2006.02665.x ID - Lamkemeyer2006 ER - TY - JOUR AU - Barski, A. AU - Zhao, K. PY - 2009 DA - 2009// TI - Genomic location analysis by ChIP-Seq JO - J Cell Biochem VL - 107 UR - https://doi.org/10.1002/jcb.22077 DO - 10.1002/jcb.22077 ID - Barski2009 ER - TY - JOUR AU - Altschul, S. F. AU - Madden, T. L. AU - Schaffer, A. A. AU - Zhang, J. AU - Zhang, Z. AU - Miller, W. AU - Lipman, D. J. PY - 1997 DA - 1997// TI - Gapped BLAST and PSI-BLAST: a new generation of protein database search programs JO - Nucleic Acids Res VL - 25 UR - https://doi.org/10.1093/nar/25.17.3389 DO - 10.1093/nar/25.17.3389 ID - Altschul1997 ER - TY - JOUR AU - Rice, P. AU - Longden, I. AU - Bleasby, A. PY - 2000 DA - 2000// TI - EMBOSS: the European Molecular Biology Open Software Suite JO - Trends Genet VL - 16 UR - https://doi.org/10.1016/S0168-9525(00)02024-2 DO - 10.1016/S0168-9525(00)02024-2 ID - Rice2000 ER - TY - JOUR AU - Bustin, S. A. AU - Benes, V. AU - Garson, J. A. AU - Hellemans, J. AU - Huggett, J. AU - Kubista, M. AU - Mueller, R. AU - Nolan, T. AU - Pfaffl, M. W. AU - Shipley, G. L. PY - 2009 DA - 2009// TI - The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments JO - Clin Chem VL - 55 UR - https://doi.org/10.1373/clinchem.2008.112797 DO - 10.1373/clinchem.2008.112797 ID - Bustin2009 ER - TY - JOUR AU - Florea, L. AU - Hartzell, G. AU - Zhang, Z. AU - Rubin, G. M. AU - Miller, W. PY - 1998 DA - 1998// TI - A computer program for aligning a cDNA sequence with a genomic DNA sequence JO - Genome Res VL - 8 ID - Florea1998 ER - TY - JOUR AU - Salamov, A. A. AU - Solovyev, V. V. PY - 2000 DA - 2000// TI - Ab initio gene finding in Drosophila genomic DNA JO - Genome Res VL - 10 UR - https://doi.org/10.1101/gr.10.4.516 DO - 10.1101/gr.10.4.516 ID - Salamov2000 ER - TY - JOUR AU - Exposito-Rodriguez, M. AU - Borges, A. A. AU - Borges-Perez, A. AU - Perez, J. A. PY - 2008 DA - 2008// TI - Selection of internal control genes for quantitative real-time RT-PCR studies during tomato development process JO - BMC Plant Biol VL - 8 UR - https://doi.org/10.1186/1471-2229-8-131 DO - 10.1186/1471-2229-8-131 ID - Exposito-Rodriguez2008 ER -