Table 7 Haplotypes of GAI in 'Herbie' and their number inferred using PHASE 2
Haplotype no. | Haplotype | Inferred no. in sample |
|---|---|---|
1 | CCAACGGAGGGGGCGCGCAG | 1 |
2 | CCACTGAAG C CGGCGCGCAG | 66 |
3 | CCACTGAAGCCGGCGGGCAG | 1 |
4 | CCACCGAGCGCCCCGCGCAG | 1 |
5 | CCACCGGAGGGGGCGCGCAG | 3 |
6 | CCGATGGGGCCGCCGCGCAG | 1 |
7 | CCGACGGAGGGGCCGCGCAG | 1 |
8 | CCGACGGGGCCGGCGCGCAG | 3 |
9 | CCGACGGGG C CGGCGCCCAG | 57 |
10 | CCGACGGGG C CGCCGCGCAG | 17 |
11 | CCGACGGGGCCGCAGCGCAG | 3 |
12 | CCGACGGGGCCCCCGCGCAG | 1 |
13 | CCGACGGGGGCCGCGCCCAG | 1 |
14 | CCGACGGGGGCCGCGGGCAG | 2 |
15 | CCGACCAGG C CGGCGCGCAG | 14 |
16 | CCGACCGGGCCCCCCCGCAG | 1 |
17 | CCGCTGAAGCCCGCGCGCAG | 1 |
18 | CCGCTGAACGCCGCGCGCAG | 3 |
19 | CCGCTGGAGCCCGCGCGCAG | 1 |
20 | CCGCTGGGGCCGGCGCGCAG | 1 |
21 | CCGCCGAAGGCCCCGCGCAG | 3 |
22 | CCGCCGAAGGCCCCCCGGGT | 8 |
23 | CCGCCGAAGGCCCACCGCAG | 1 |
24 | CCGCCGAAG G CCCACGGCAG | 56 |
25 | CCGCCGAAG G CCCACGGCGG | 15 |
26 | CCGCCGAGCGCGCCGCGCAG | 1 |
27 | CCGCCGAGC G CCCCGCGCAG | 50 |
28 | CCGCCGGAGGCCCCGCGCAG | 2 |
29 | CCGCCGGAGGGGGCGCGCAG | 1 |
30 | CCGCCGGAG G GGCCGCGCAG | 18 |
31 | CCGCCGGAGGGGCCCCGCAG | 5 |
32 | CCGCCGGAGGGCCCGCGCAG | 1 |
33 | CCGCCGGACGCCCCCGGCAG | 3 |
34 | CCGCCGGGGGCCCCGCGCAG | 3 |
35 | CCGCCGGGGGCCCCGGGCAG | 1 |
36 | CCGCCCGGGCCCCCCCGCAG | 3 |
37 | CCGCCCGGG G CCCCGCGCAG | 26 |
38 | CGGCCCGAGGCGCCCGGCAG | 1 |
39 | ACACTGAAGCCGGCGCGCAG | 3 |