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Table 2 Four cis-elements abundant in genes specifically enriched in five tissues of O. longistaminat a identified by bioinformatic analyses of the promoter regions of the genes involved.

From: Identification of rhizome-specific genes by genome-wide differential expression Analysis in Oryza longistaminata

Tissue type RT RI ST SI YL
No. of tested genes 56 57 61 27 64
  Total (%) 75.0 ± 11.3 98.2 ± 3.5 a 77.0 ± 10.6 77.8 ± 15.7 64.1 ± 11.8
CGACG element (CGACG) Single copy (%) 39.3 47.3 39.3 48.2 40.7
  Two or more copies (%) 35.7 50.9 37.7 29.6 23.4
  Total (%) 53.6 ± 13.1 73.7 ± 11.4b 59.0 ± 12.3 37.0 ± 18.2 39.1 ± 12.0
GCCCORE (GCCGCC) Single copy (%) 39.3 45.6 24.6 29.6 25.0
  Two or more copies (%) 14.3 28.1 34.4 7.4 14.1
  Total (%) 98.2 ± 3.5 c 78.9 ± 10.6 78.7 ± 10.3 88.9 ± 11.8 b 78.1 ± 10.1
SURECOREATSULTR11 (GAGAC) Single copy (%) 66.1 49.1 55.7 48.2 54.7
  Two or more copies (%) 32.1 29.8 23.0 40.7 23.4
  Total (%) 64.3 ± 12.5 86 ± 9.0 b 83.6 ± 9.3 c 66.7 ± 17.8 67.2 ± 11.5
Myb core (AACGG) Single copy (%) 50.0 52.7 59.0 55.6 48.4
  Two or more copies (%) 14.3 33.3 24.6 11.1 18.8
  1. a The range about the average indicates 95% confidence limits for p among five treatments.
  2. b The range about the average indicates 95% confidence limits for p between RI and SI treatments.
  3. c The range about the average indicates 95% confidence limits for p between RT and ST treatments.