|
Sequence read
|
Full-length
|
RamÃrez
|
Tibivilliers1
|
|---|
|
Clones
|
9,984
|
21,096
|
20,736
|
|
Sequence reads (after LQ & vector trimming)
|
7,079
|
15,781
|
37,919
|
|
Singletons
|
1,238
|
5,703
|
3,544
|
|
Contigs
|
2,981
|
2,266
|
7,510
|
|
Unigenes
|
4,219
|
7,969
|
10,581
|
|
Proportion of unigenes per sequence (%)
|
59.6%
|
50.5%
|
27.9%
|
|
Average EST length (nt)
|
563.8
|
606.2
|
656.4
|
|
Average contig length (nt)
|
677.9
|
606.2
|
1024.2
|
|
Average singleton length (nt)
|
568.3
|
594.7
|
691.7
|
- Two EST sequencing efforts are compared to the ESTs generated for the full-length cDNA libraries made in this study
- 1 clones from Thibivilliers et al. (2009) sequenced from both ends of the insert while those of Ramirez and this study were 5'end sequenced.
