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Table 1 Details of pigeonpea transcriptome shotgun sequence reads and their assembly into TSA contigs using 454-Newbler assembler

From: Development of genic-SSR markers by deep transcriptome sequencing in pigeonpea [Cajanus cajan (L.) Millspaugh]

Variety No. of sequence reads Sequence length (bp) Average read length (bp) Average depth Total no. of contigs No. of bases in contigs (bp)
Asha 906,300 303,202,320 335 10.41 35,204 25,404,562
UPAS 120 790,424 263,411,375 333 10.10 30,147 22,824,365
Total 1,696,724 566,613,695 334 10.25 65,351 48,228,927