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Table 6 Differentially expressed genes (P < 0.05, ≥1.75-fold) in Chardonnay grapevine berries between 10-days after theoretical harvest (TH+10) and theoretical harvest date (TH) of the 2005 and 2006 growing seasons.

From: Transcriptional analysis of late ripening stages of grapevine berry

Putative function

Grape Microarray Accession Number (Vv_#)

Grape Nucleotide Accession Number (mRNA)

Grape Gene Accession Number (GSVIVT#)

Most Homologous ArabidopsisSequence

WBB average ratio

p-value

DSB average ratio

p-value

Aroma related genes

        

Valencene synthase (VvValCS)

Vv_10004183

FJ696653/AY561843

GSVIVT01036322001

At5g23960

2.031

2.00E-05

1.823

2.00E-05

Pathogenesis-related genes

        

Pathogenesis-related protein 1 (PR-1)

Vv_10011243

AJ536326

GSVIVT01037015001

At2g14580

2.049

3.00E-05

1.558

0.00024

Pathogenesis-related protein 1 (PR-1)

Vv_10004981

XM_002274239

GSVIVT01037014001

At2g14610

2.059

0.00016

1.637

0.00029

Beta-1,3-glucanase (PR-2)

Vv_10010418

AF239617

GSVIVT01035013001

At4g16260

1.566

0.00014

0.994

0.00133

Thaumatin-like protein (PR-5)

Vv_10000872

XM_002282994

GSVIVT01019840001

At4g11650

1.337

0.00018

1.273

0.00019

Leucine-rich repeat protein

Vv_10000077

XM_002263817

GSVIVT01032059001

At3g20820

-1.26

0.00015

-1.668

0.0012

Stress-related genes

        

Heat shock protein

Vv_10011030

XM_002281184

GSVIVT01016426001

At5g59720

-1.157

0.00016

-1.399

0.00027

Heat shock protein

Vv_10000006

XM_002281358

GSVIVT01016429001

At3g46230

-0.951

0.00788

-1.133

0.00038

Heat shock protein

Vv_10011029

XM_002281318

GSVIVT01016428001

At3g46230

-1.136

7.00E-04

-1.351

0.00013

Growth and development-related genes

        

TFL1C protein

Vv_10003390

XM_002278819

GSVIVT01010598001

At5g62040

0.929

0.00023

1.208

0.00025

Rapid ALkalinization Factor-like protein

Vv_10004862

XM_002282632

GSVIVT01022118001

-

-0.962

0.00191

-1.067

0.00235

Cell wall-modifying enzymes

        

Polygalacturonase-like protein

Vv_10013430

XM_002278894

GSVIVT01019405001

At4g23500

1.376

0.00066

1.335

0.00031

Pectate lyase (VvPL1)

Vv_10010773

AY043234

GSVIVT01029048001

At1g04680

-1.014

0.00031

-1.677

0.00043

Hormone metabolism and regulation

        

Auxin-responsive protein

Vv_10002615

XM_002284085

GSVIVT01018099001

At5g43700

1.08

0.00032

0.946

0.00047

Auxin-responsive protein

Vv_10009542

XM_002279919

GSVIVT01021779001

At1g04240

1.736

7.00E-05

1.415

0.00045

Gibberellin 2-oxidase

Vv_10009047

XM_002268137

GSVIVT01012628001

At4g21200

-1.197

0.00069

-1.046

0.00037

Transporters and trafficking

        

Aquaporin (TIP1;2)

Vv_10003817

DQ834702

GSVIVT01033677001

At2g36830

-0.802

0.00097

-1.286

0.00022

Vacuolar pyrophosphatase

        

(vpp2)

Vv_10000514

AJ557256

GSVIVT01012841001

At1g15690

-0.997

0.00018

-0.911

0.00048

Miscellaneous

        

Homeobox leucine zipper protein

Vv_10004955

XM_002262914

GSVIVT01027407001

At3g61890

-1.065

0.00029

-1.076

3.00E-04

Heavy-metal-associated domain-containing protein

Vv_10002809

XM_002277832

GSVIVT01025598001

At5g02600

-0.975

0.00029

-0.95

0.00046

GDSL-motif lipase/hydrolase family protein

Vv_10000511

XM_002271815

GSVIVT01030528001

At4g26790

-0.82

0.00068

-0.853

0.00087

Amino acid transporter

Vv_10014047

XM_002283432

GSVIVT01011401001

At3g28960

-1.053

0.00122

-1.186

0.00031

Copper ion binding oxidoreductase

Vv_10001170

XM_002275642

GSVIVT01037479001

At5g21105

-0.849

0.00036

-0.866

0.00052

Peptidase/subtilase

Vv_10008612

XM_002278256

GSVIVT01015069001

At2g05920

-1.134

0.00068

-1.101

0.00131

  1. Genes are organized in functional categories. Ratio values are presented as log2. DSB, densimetrically sorted berries; TH, theoretical harvest; TH+10, 10-days after harvest; WBB, whole bunch berries.