Skip to main content

Table 5 Differentially expressed genes (P < 0.05, ≥1.75-fold) in Chardonnay grapevine berries between theoretical harvest date (TH) and one week before (TH-7) of the 2005 and 2006 growing seasons.

From: Transcriptional analysis of late ripening stages of grapevine berry

Putative function Grape Microarray Accession Number (Vv_#) Grape Nucleotide Accession Number (mRNA) Grape Gene Accession Number (GSVIVT#) Most Homologous Arabidopsis Sequence WBB average ratio p-value DSB average ratio p-value
Cell wall related genes         
Alpha-expansin Vv_10001623 XM_002284822 GSVIVT01007987001 At1g69530 -1.14 0.00032 -0.829 0.00246
Polygalacturonate 4-alpha-galacturonosyltransferase Vv_10003714 XM_002271124 GSVIVT01020141001 At1g70090 -1.501 0.00027 -1.585 0.00022
Xyloglucan endotransglycosylase/hydrolase Vv_10011203 XM_002274118 GSVIVT01029170001 At5g57550 -0.884 0.00045 -0.799 0.00062
Xyloglucan endotransglycosylase/hydrolase Vv_10011021 XM_002274791 GSVIVT01029162001 At5g57560 -1.223 0.00014 -1.2 0.00018
Xyloglucan endotransglycosylase/hydrolase Vv_10010901 XM_002262725 GSVIVT01031601001 At3g23730 -1.1 0.00033 -1.36 0.00014
Xyloglucan endotransglucosylase/hydrolase Vv_10011290 XM_002274516 GSVIVT01029166001 At4g25810 -1.472 6.00E-05 -1.475 7.00E-05
Biotic and abiotic stress related proteins         
Pathogenesis-related protein 10 Vv_10003874 XM_002274749 GSVIVT01035055001 - 1.542 0.00156 1.086 0.00016
Miraculin-like protein Vv_10011266 XM_002266394 GSVIVT01012922001 At1g17860 -2.409 9.00E-05 -0.994 0.00104
Transporters         
Sulfate transporter Vv_10001315 XM_002279177 GSVIVT01018028001 At3g51895 -1.207 0.00084 -0.907 0.00169
Transcription factors         
TCP transcription factor Vv_10010249 XM_002272192 GSVIVT01012766001 At1g72010 -1.233 0.00021 -1.038 0.00014
bZIP transcription factor Vv_10007432 XM_002285275 GSVIVT01014246001 At3g58120 -1.499 7.00E-05 -1.535 5.00E-05
Miscellaneous         
Phosphate-induced protein Vv_10000589 XM_002285726 GSVIVT01009065001 At4g08950 -2.342 0.00021 -1.885 2.00E-04
Phosphate-induced protein Vv_10000871 XM_002282859 GSVIVT01023873001 At2g17230 -1.141 0.00157 -1.184 0.00098
beta-ketoacyl-CoA synthase Vv_10004485 XM_002284950 GSVIVT01015472001 At2g26640 -0.845 0.00211 -0.883 0.00212
Metal ion binding protein Vv_10004892 XM_002281195 GSVIVT01022185001 At4g39700 -1.045 0.00016 -1.325 0.00011
AAA-type ATPase family protein Vv_10010867 XM_002268820 GSVIVT01023336001 At3g28600 -1.28 0.00026 -1.176 0.00015
AAA-type ATPase family protein Vv_10012487 XM_002280929 GSVIVT01015385001 At3g24530 -0.805 0.00072 -0.859 0.00099
Aspartyl protease protein Vv_10002995 XM_002265735 GSVIVT01036694001 At3g12700 -2.0 6.00E-05 -1.975 3.00E-05
Protease inhibitor Vv_10001691 XM_002266266 GSVIVT01012936001 At1g17860 -3.046 1.00E-05 -0.872 0.00418
PS60 protein/multicopper oxidase Vv_10000492 XM_002282178 GSVIVT01023902001 At1g76160 -0.922 0.00088 -0.846 0.00141
  1. Genes are organized in functional categories. Ratio values are presented as log2. DSB, densimetrically sorted berries; TH-7, 7-days before theoretical harvest; TH, theoretical harvest; WBB, whole bunch berries.