Assembly | Â | Annotation of isotigs | Â |
---|---|---|---|
Total reads | 492 102 | Nr. with BLASTx | 13 390 |
Total bases | 146391859 | homology | Â |
Assembled reads | 242 206 | Nr. GO Annotated | 8 468 |
Inferred read error | 1.51% | GO Annotations | 41 330 |
Q40* | 94.53% | Nr. with KEGG EC | 3 605 |
Singletons | 5 5334 | Total KEGG EC Nr. | 45 183 |
Isogroups ("genes") | 9 678 | Nr. InterproscanTotal | 79 194 |
Isotigs ("transcripts") | 14 364 | Â | Â |
Isotig N50 | 769 | Â | Â |
Mean no. isotigs per isogroup | 1.5 | Â | Â |
Isogroups with one Isotig | 7239 | Â | Â |
Contigs ("exons") | 17228 | Â | Â |
Mean no. contigs per isotig | 2 | Â | Â |