A 48 SNP set for grapevine cultivar identification

Table 3 Genotyping efficiency and reliability of the 48 SNP set

	N° Plants	Rate
Genotyped*	1277
Complete genotype	990	0.775
> 95% genotype	1155	0.904
SNP highest genotyping success rate	1275 (SNP697_296)	0.998
SNP lowest genotyping success rate	1139 (SNP325_65)	0.892
	N° individual SNP genotypes	Rate
Total	60019
Obtained	58256	0.971
N° mistaken genotypes	3	0.000051

* Excluding 1 SNP that did not work in this experiment and 65 plants for which none SNP genotype could be established.