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Table 2 Genotypes for the 48 SNP set in the cultivars used for the stability study

From: A 48 SNP set for grapevine cultivar identification

  AIR CBS CAR CRI FLA MER MON MOA NAP OHA PAL REG SAU TEM THO
N° plants with complete genotype 70 56 79 80 55 77 75 86 82 84 81 64 64 58 54
SNP1003_336 AC AA AA AC AA CC AC AC AC AC AC AC AC CC AC
SNP1015_67 GG GG GG AA GG GG GG GG GG AG GG GG AG GG AG
SNP1027_69 CT CC CT CT CT CC CT CC CT CT TT CC CC CC CT
SNP1035_226 CT TT TT CC CT TT TT CT CC CT TT CT TT CT CT
SNP1079_58 AA AG AG AA AA AA AG AG AG AA AG GG GG AG AG
SNP1119_176 AA CC* CC AA CC AA CC* CC* AA AA CC* CC* CC CC CC
SNP1127_70 GG GT GG GG GG GT GG GT GG GG GG GT GT GG GG
SNP1157_64 TT AT AT AT TT TT TT TT AT AT TT TT AT TT TT
SNP1215_138 CC CC CT CC CC TT CT CT CT CT CT CT CT CC CT
SNP1229_219 CC CC CC CC CC CC CC CC CC CC CC CC CC CC CG
SNP1323_155 CC CC CC AA AA AC AA AC AA AC CC CC AC AC AC
SNP1347_100 AG AG AG AG AG AG AA GG GG GG AG AG AG GG AG
SNP1349_174 GG AG AA AG AA AG GG AA AG AG AG GG AA AA AG
SNP1399_81 AA AG AA AA AA AA AA AA AG AA AA AA AG AA AA
SNP1411_565 TT TT TT TT TT AA AT AT TT TT AT AA TT AT AT
SNP1445_218 AG AA GG AG GG AA AA GG GG GG GG AG AG GG AG
SNP1453_40 AA AA AG AG AA AG AA AG AG AA AG AG AG GG AA
SNP1471_179 TT CT CT TT TT TT TT CT CT TT TT TT CT CT TT
SNP1513_153 TT CT CT TT CT CC CT TT CT CT CT TT CC CC CT
SNP191_100 CC CT CC CC CC CC CC CC CC CC CC CC CT CC CC
SNP197_82 CC AC CC AC CC AC AA CC CC CC CC CC AC AA CC
SNP227_191 AA AC AC AA AA AC AC AA AA AA AA AC AA AC CC
SNP259_199 AT AT TT AT TT TT AT AT TT AT TT AA TT AA AA
SNP269_308 GG GG AG AA AG AG AG AA AA AA AG AG AG GG AA
SNP325_65 TT AT AT AA AA AA AT AA AA AA AT AA AA TT AA
SNP425_205 AA AC AA AA AA CC AA AA AA AA CC AA AC AA AA
SNP447_244 CT CT TT CT TT CT TT CT CT CT CC CT CT CC CT
SNP555_132 AA AA AC AC AA AC AC CC AA AA AA AA AC AC AA
SNP579_187 TT TT TT CT TT TT CT TT TT TT CT TT TT TT TT
SNP581_114 AG AG AA AG AG AG AG AG AG GG AG AA GG AG AG
SNP593_149 CT CT CT CT TT CT TT CT TT TT CT TT CT TT CT
SNP613_315 CT CC CC CC CC CC CT CC CC CT CT CC CC CC CT
SNP697_296 AG AA AA AA AA AA AA AA AA AA AA AA AA AA AA
SNP819_210 AT TT AT TT TT AT AA AT TT AA TT TT TT AA TT
SNP829_281 AG AG AG AG AG AA AA AG GG AG AG AG AG AA GG
SNP873_244 CT TT CC CC CC CC CT CT CT CC TT CC CT TT CT
SNP879_308 GG AG AG AG AA AA AG AA AA AG GG AA GG AA AA
SNP895_382 AT TT AT AT AT TT TT AA AA AT AT AT TT AA AT
SNP945_88 AA AG AA AG AA AG AA AG AG AG AG AG GG AG AG
SNP947_288 AG AG AG GG GG AG GG AG AG AG AG GG AG AG AG
VV10113 AA AG AA AG AA AA AA AA AA AG AG AA AA AA AG
VV10329 CT CT TT TT TT CC CT CT CC CC CT CT TT CT TT
VV10353 GG AG GG GG GG AG GG AG GG GG GG AG GG GG AG
VV10992 TT AT AT AT TT AT AT AT AT AT AT TT AA TT TT
VV12882 TT CT TT TT TT TT CC TT TT TT TT TT CC TT TT
VV1617                
VV9227 AT AT AT TT TT TT - TT TT TT AT TT AT TT TT
VV9920 GG AG AG GG GG AG GG AA AA GG GG GG GG AA GG
  1. AIR: Airén; CBS: Cabernet Sauvignon; CAR: Cardinal; CRI: Crimson Seedless; FLA: Flame Seedless; ITA: Italia; MER: Merlot; MON: Monastrell; MOA: Muscat of Alexandria; NAP: Napoleon; OHA: Ohanes; PAL: Palomino; REG: Red Globe; SAU: Sauvignon Blanc; TEM: Tempranillo; THO: Thompson Seedless.
  2. *The correct genotype is AC, according to data obtained later (see text)
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BMC Plant Biology

ISSN: 1471-2229

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