Table 1 Main features of the 48 SNP Set
Physical position | Genetic position | ||||
|---|---|---|---|---|---|
SNP | Polymorphism | Chromosome | Nucleotide | LG | cM |
SNP1003_336 | A/C | 18 | 3829207 | 18 | 16.7 |
SNP1015_67 | A/G | unknown | 8839239 | 7 | 40.4 |
SNP1027_69 | C/T | 5 | 1785979 | 5 | 3.3 |
SNP1035_226 | C/T | 14 | 29590769 | 14 | 63.4 |
SNP1079_58 | A/G | 16 | 13454358 | 16 | 18.9 |
SNP1119_176 | A/C | 12 | 22228357 | 12 | 67.4 |
SNP1127_70 | G/T | 19 | 17751334 | 19 | 53.6 |
SNP1157_64 | A/T | 1 | 22828604 | 1 | 60.6 |
SNP1215_138 | C/T | 12 | 739916 | 12 | 21.9 |
SNP1229_219 | G/C | 2 | 17198115 | 2 | 52.7 |
SNP1323_155 | A/C | 8 | 13401437 | 8 | 36.6 |
SNP1347_100 | A/G | 7 | 1388822 | 7 | 0 |
SNP1349_174 | A/G | 16 | 21202286 | 16 | 50.1 |
SNP1399_81 | A/G | 4 | 21849155 | 4 | 66.5 |
SNP1411_565 | A/T | 14 | 23135445 | 14 | 38.1 |
SNP1445_218 | A/G | 7 | 18046355 | 7 | 81.7 |
SNP1453_40 | A/G | 1 | 729514 | 1 | 0.7 |
SNP1471_179 | C/T | 5 | 5773320 | 5 | 26 |
SNP1513_153 | C/T | 4 | 680574 | 4 | 0 |
SNP191_100 | C/T | 4 | 6409234 | 4 | 24 |
SNP197_82 | A/C | 11 | 311765 | 11 | 0 |
SNP227_191 | A/C | 15 | 15145042 | 15 | 21.3 |
SNP259_199 | A/T | 13 | 21618145 | 13 | 48.7 |
SNP269_308 | A/G | 1 | 5948674 | 1 | 29.3 |
SNP325_65 | A/T | 14 | 5687725 | 14 | 15.2 |
SNP425_205 | A/C | 3 | 3676120 | 3 | 29.9 |
SNP447_244 | C/T | 10 | 5489212 | 10 | 37.5 |
SNP555_132 | A/C | 15 | 18031506 | 15 | 34 |
SNP579_187 | C/T | 17 | 6000914 | 17 | 38.5 |
SNP581_114 | A/G | 2 | 5141894 | 2 | 24.6 |
SNP593_149 | C/T | 8 | 3320936 | 8 | 7.9 |
SNP613_315 | C/T | 3 | 1348328 | 3 | 0 |
SNP697_296 | A/G | 13 | 5613947 | unknown | unknown |
SNP819_210 | A/T | 19 | 7217380 | 19 | 42.1 |
SNP829_281 | A/G | 2 | 415342 | 2 | 0 |
SNP873_244 | C/T | 6 | 4258638 | 6 | 14 |
SNP879_308 | A/G | 17 | 12206201 | 17 | 64 |
SNP895_382 | A/T | 6 | 17593092 | 6 | 56.7 |
SNP945_88 | A/G | 6 | 327200 | 6 | 0 |
SNP947_288 | A/G | unknown | 9111477 | 10 | 4.8 |
VV10113 | A/G | 5 | 6744629 | 5 | 25 |
VV10329 | C/T | 9 | 21409416 | 9 | 53.1 |
VV10353 | G/A | 11 | 19390306 | 11 | 64.1 |
VV10992 | A/T | 9 | 3123999 | 9 | 14.1 |
VV12882 | T/C | 12 | 7768973 | 12 | 40.5 |
VV1617 | A/C | 18 | 6487636 | 18 | 27.9 |
VV9227 | T/A | 2 | 6474327 | 2 | 37.4 |
VV9920 | A/G | 18 | 11138668 | 18 | 48.5 |