Table 2 Expression of BURP gene family members as measured by DGE and RNA-Seq.
From: Transcript profiling reveals expression differences in wild-type and glabrous soybean lines
| Â | Â | Â | DGE | RNASeq | ||||
|---|---|---|---|---|---|---|---|---|
| Â | Â | Â | Norm Counts | Â | Ratio | RPKM | Â | Ratio |
BURP genes | e-value | DGE tags | CS | CG | CS/CG | CS | CG | CS/CG |
Glyma04g35130 | 0 | DGE0000012 | 2544.68 | 1.06 | 2392.00 | 480.38 | 0.01 | 45679.50 |
Glyma07g28940 | 4.4E-43 | no tag | 0.00 | 0.00 | 0.00 | 2.86 | 1.07 | 2.68 |
Glyma04g08410 | 1.4E-30 | DGE0060859 | 0.85 | 11.70 | 0.07 | 1.43 | 0.48 | 2.99 |
Glyma14g20450 | 7.5E-15 | DGE0001112 | 147.02 | 80.64 | 1.82 | 0.00 | 0.00 | 0.00 |
Glyma06g08540 | 3.2E-13 | DGE0060859 | 0.85 | 11.70 | 0.07 | 66.07 | 6.79 | 9.73 |
Glyma14g20440 | 3.2E-13 | DGE0002418 | 78.09 | 24.68 | 3.16 | 51.77 | 10.97 | 4.72 |
Glyma06g01570 | 3.60E-06 | DGE0000631 | 236.38 | 248.51 | 0.95 | 0.56 | 0.26 | 2.14 |