Table 3 Comparative controls for quantification of maternal expression of ATCDC48A by QUASEP.
Gene | Name | SNP | Col-0 allele (maternal) | C24/Ler-0 allele (maternal | Mean maternal | Imprinted status |
|---|---|---|---|---|---|---|
At3g09840 | CDC48A | Col-0/C24 | 100.0% | 80.5% | 90.4% | MEG test gene |
At4g25530 | FWA | Col-0/Ler-0 | 92.1% | 97.1% | 94.6% | MEG control gene |
At1g65330 | PHE1 | Col-0/Ler-0 | 27.4% | 12.8% | 21.1% | PEG control gene |
At1g65330 | PHE2 | Col-0/Ler-0 | 56.3% | 35.3% | 45.8% | Biallelic control |