Table 2 Maternally expressed genes ranked by absolute expression level difference between highest-expressing endosperm fraction and seed coat
Gene ID | Seed coat expression level | Embryo expression level | Peripheral endosperm expression level | Micropylar endosperm expression level | Chalazal endosperm expression level | Absolute difference of expression levels between highest-expressing endosperm fraction and seed coat (hEF-SC) | Ratio of expression levels between highest-expressing endosperm fraction and seed coat (hEF/SC) |
|---|---|---|---|---|---|---|---|
At3g09840 (AtCDC48A) | 9462.69 | 12859.55 | 8565.74 | 7199.95 | 15983.67 * | 6520.97 | 1.69 |
At5g16620 (PDE120) | 1882.19 | 3721.39 | 7328.89 * | 1547.72 | 594.65 | 5446.69 | 3.89 |
At3g51280 (MS5) | 143.71 | 6909.54 | 3598.61 * | 425.12 | 170.39 | 3454.9 | 25.04 |
At4g16830 | 1403.41 | 2234.66 | 3777.26 * | 3520.61 | 1358.85 | 2373.85 | 2.69 |
At5g63330 | 364.44 | 215.12 | 512.38 | 340.48 | 1942.53 * | 1578.09 | 5.33 |
At1g73680 | 2286.18 | 68.31 | 1281.93 | 3787.4 * | 1095.28 | 1501.21 | 1.66 |
At1g03070 | 150.95 | 22.77 | 43.96 | 70.68 | 1273.49 * | 1122.55 | 8.44 |
At3g24530 | 839.73 | 1359.11 | 1940.84 * | 1502.07 | 352.68 | 1101.11 | 2.31 |
At1g65820 | 757.13 | 253.23 | 413.46 | 1813.32 * | 612.73 | 1056.2 | 2.39 |
At3g17000 | 416.34 | 137.53 | 165.76 | 440.71 | 1401.76 * | 985.42 | 3.37 |
At5g39510 | 1934.73 | 812.5 | 1357.99 | 2472.39 * | 2071.39 | 537.65 | 1.28 |
At1g25370 | 362.23 | 56.59 | 52.88 | 339.09 | 718.4 * | 356.17 | 1.98 |
At3g59380 | 333.7 | 299 | 481.63 | 597.3 | 631.7 * | 298.01 | 1.89 |
At3g55250 | 183.62 | 264.14 | 461.66 * | 219.78 | 83.6 | 278.04 | 2.51 |
At2g31510 | 398.3 | 455.28 | 416.09 | 642.15 * | 195.12 | 243.85 | 1.61 |
At2g16480 | 620.32 | 793.04 | 854.07 * | 611.2 | 577.62 | 233.75 | 1.38 |
At1g61990 | 265.14 | 479.11 | 335.01 | 403.18 | 470.95 * | 205.81 | 1.78 |
At2g32000 | 280.44 | 244.55 | 333.14 * | 176.92 | 98.83 | 52.7 | 1.19 |