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Table 1 Samples used in spatiotemporal gene expression profiling

From: Field transcriptome revealed critical developmental and physiological transitions involved in the expression of growth potential in japonicarice

No. Sample ID Organ/Tissue Sampling details Replicate
1 LB1 Leaf blade 27 days after transplanting_12:00 3
2 LB2 Leaf blade 27 days after transplanting_24:00 3
3 LB3 Leaf blade 76 days after transplanting_12:00 3
4 LB4 Leaf blade 76 days after transplanting_24:00 3
5 LB5 Leaf blade 125 days after transplanting_12:00 3
6 LB6 Leaf blade 125 days after transplanting_24:00 3
7 LS1 Leaf sheath 27 days after transplanting_12:00 3
8 LS2 Leaf sheath 27 days after transplanting_24:00 3
9 LS3 Leaf sheath 76 days after transplanting_12:00 3
10 LS4 Leaf sheath 76 days after transplanting_24:00 3
11 RO1 Root 27 days after transplanting_12:00 3
12 RO2 Root 27 days after transplanting_24:00 3
13 RO3 Root 76 days after transplanting_12:00 3
14 RO4 Root 76 days after transplanting_24:00 3
15 ST1 Stem 83 days after transplanting_12:00 3
16 ST2 Stem 83 days after transplanting_24:00 3
17 ST3 Stem 90 days after transplanting_12:00 3
18 ST4 Stem 90 days after transplanting_24:00 3
19 IN1 Inflorescence Inflorescence length 0.6-1.0 mm 3
20 IN2 Inflorescence Inflorescence length 3.0-4.0 mm 3
21 IN3 Inflorescence Inflorescence length 5.0-10.0 mm 3
22 AN1 Anther Anther length 0.3-0.6 mm 2
23 AN2 Anther Anther length 0.7-1.0 mm 3
24 AN3 Anther Anther length 1.2-1.5 mm 3
25 AN4 Anther Anther length 1.6-2.0 mm 3
26 PI1 Pistil Pistil from 05-10 cm inflorescence 3
27 PI2 Pistil Pistil from 10-14 cm inflorescence 3
28 PI3 Pistil Pistil from 14-18 cm inflorescence 3
29 LE1 Lemma Lemma from 1.5-2.0 mm floret 3
38 PA1 Palea Palea from 1.5-2.0 mm floret 3
31 LE2 Lemma Lemma from 4.0-5.0 mm floret 3
32 PA2 Palea Palea from 4.0-5.0 mm floret 3
33 LE3 Lemma Lemma from >7.0 mm floret 3
34 PA3 Palea Palea from >7.0 mm floret 3
35 OV1 Ovary Ovary at 1 day after flowering_10:00 3
36 OV2 Ovary Ovary at 3 days after flowering_10:00 3
37 OV3 Ovary Ovary at 5 days after flowering_10:00 3
38 OV4 Ovary Ovary at 7 days after flowering_10:00 3
39 EM1 Embryo Embryo at 07 days after flowering_10:00 3
40 EM2 Embryo Embryo at 10 days after flowering_10:00 3
41 EM3 Embryo Embryo at 14 days after flowering_10:00 3
42 EM4 Embryo Embryo at 28 days after flowering_10:00 3
43 EM5 Embryo Embryo at 42 days after flowering_10:00 3
44 EN1 Endosperm Endosperm at 07 days after flowering_10:00 3
45 EN2 Endosperm Endosperm at 10 days after flowering_10:00 3
46 EN3 Endosperm Endosperm at 14 days after flowering_10:00 3
47 EN4 Endosperm Endosperm at 28 days after flowering_10:00 3
48 EN5 Endosperm Endosperm at 42 days after flowering_10:00 3