Skip to main content

Table 1 The numbers of transcript derived fragments (TDFs) in some of the biological function categories showing up- or down- regulated expression pattern in wheat (cv. Suwon 11) leaves inoculated with Puccinia striiformis f. sp. tritici (pathotype CYR23)

From: Differential gene expression in incompatible interaction between wheat and stripe rust fungus revealed by cDNA-AFLP and comparison to compatible interaction

    Expression pattern (% in category)
Function group Number Percentage (%) Up (%) Down (%)
1. Sequenced 255 10.5 187 (73.3) 68 (26.7)
   Metabolism 11 4.3 8 (72.7) 3 (27.3)
   Energy 34 13.3 26 (76.5) 8 (23.5)
   Cell growth/division 3 1.2 2 (66.7) 1 (33.3)
   Transcription 12 4.7 11 (91.7) 1 (8.3)
   Protein synthesis 3 1.2 3 0
   Protein destination and storage 6 2.4 3 (50.0) 3 (50.0)
   Transporters 6 2.4 5 (83.3) 1 (16.7)
   Intracellular traffic 1 0.4 1 0
   Cell structure 2 0.8 2 0
   Signal transduction 17 6.7 14 (82.4) 3 (17.6)
   Disease/defense 18 7.1 15 (83.3) 3 (16.7)
   Unclassified 107 42.0 72 (67.3) 35 (32.7)
   Unclear classification 35 13.7 25 (71.4) 10 (28.6)
2. Unsequenced 2,182 89.5 1,600 (73.3) 582 (26.7)
Total 2,437 100.0 1,787 (73.3) 650 (26.7)