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Figure 2 | BMC Plant Biology

Figure 2

From: Transcript profiling of common bean (Phaseolus vulgaris L.) using the GeneChip®Soybean Genome Array: optimizing analysis by masking biased probes

Figure 2

Masking putative probes targeting ISV regions. For each common bean tissue sample, three biological replicates were collected producing a total of 9 data points per probe (3 tissue types × 3 replicates). For a particular probe, all data points were kept if three or more signals were above the signal intensity threshold. Otherwise, all 9 signals were masked (see Methods for details). Red and grey squares represent signals above and below the masking signal intensity threshold, respectively. Asterisk, probes with less than 3 signals above the masking signal intensity threshold.

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