Table 1 Differentially regulated nitrogen assimilation and metabolism genes.
From: Tomato root transcriptome response to a nitrogen-enriched soil patch
Probe Set ID | Putative Annotation | Fold Change (High N vs. water) | P-value | Fold Change (Low N vs. water) | P-value |
|---|---|---|---|---|---|
Les.224.1.S1_at | glutamine synthetase | 16.69 | 0.002 | 6.31 | 0.024 |
Les.2360.1.S1_at | nitrite reductase | 4.25 | 0.044 | 1.39 | 0.364 |
Les.3640.1.S1_at | ammonium transporter | 4.07 | 0.045 | 1.24 | 0.638 |
Les.2884.1.S1_at | glutamine synthetase | 3.23 | 0.044 | 1.39 | 0.365 |
Les.28.2.S1_a_at | nitrate transporter 2.1 | 2.61 | 0.082 | 1.42 | 0.402 |
Les.987.1.A1_at | aspartate aminotransferase | 2.29 | 0.050 | -1.02 | 0.943 |
Les.987.3.S1_at | aspartate aminotransferase | 2.18 | 0.044 | -1.34 | 0.216 |
Les.5163.1.S1_at | dicarboxylate transport | 1.85 | 0.075 | 1.99 | 0.105 |
Les.899.1.S1_at | NADH-dependent glutamate synthase | 1.76 | 0.064 | -1.05 | 0.834 |
Les.3626.1.S1_at | alanine aminotransferase | 1.71 | 0.092 | 1.36 | 0.246 |
Les.2756.1.A1_at | tryptophan synthase-related | 1.53 | 0.095 | 2.01 | 0.078 |
Les.231.1.S1_at | O-acetyl(thiol)serine lyase | 1.32 | 0.136 | 1.63 | 0.088 |
Les.3660.1.S1_at | chorismate synthase 2 | -1.73 | 0.061 | -1.36 | 0.180 |
Les.299.1.S1_at | peptide transporter 1 | -1.75 | 0.093 | -1.37 | 0.254 |
Les.797.1.S1_at | ammonium tranporter 1 | -1.80 | 0.065 | -1.09 | 0.700 |
Les.3289.1.S1_at | g-aminobutyrate transaminase subunit precursor | -1.84 | 0.053 | -1.76 | 0.105 |
Les.7.1.S1_at | homogentisate 1,2-dioxygenase HGO | -1.98 | 0.092 | -1.54 | 0.214 |
Les.1493.1.S1_at | nitrilase | -2.02 | 0.098 | -1.65 | 0.192 |
LesAffx.3336.1.S1_at | cystathionine beta-synthase domain protein | -2.15 | 0.108 | -3.60 | 0.078 |
Les.3071.1.S1_at | alpha-aminoadipic semialdehyde synthase | -2.27 | 0.067 | -2.35 | 0.105 |
Les.5024.1.S1_at | ANR1-like MADS-box transcription factor | -3.26 | 0.067 | -2.28 | 0.156 |