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Table 2 Agreement of microarray and qRT-PCR data.

From: Transcriptional profiles underlying parent-of-origin effects in seeds of Arabidopsis thaliana

 

msi1

6xX2x

4xX2x

2xX4x

2xX6x

fis1X2x

Affymetrix

13 (65%)

15 (75%)

18 (90%)

14 (70%)

17 (85%)

18(90%)

Agilent

 

15 (75%)

8 (40%)

17 (85%)

19 (95%)

16 (80%)

  1. Expression of 20 genes was tested using qRT-PCR and calls of up, down, or not changed were compared with calls for the same genes in the microarray data. Each cell shows the number (percentage) of calls that agreed out of a maximum of 20. qRT-PCR results are provided in Additional file 4 table S4.