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Table 1 Best matches of consensus sequences from Butte 86 contigs to NCBI non-redundant database.

From: Analysis of expressed sequence tags from a single wheat cultivar facilitates interpretation of tandem mass spectrometry data and discrimination of gamma gliadin proteins that may play different functional roles in flour

Contig # # ESTs NCBI Accession1 Identity Source Type
1 192 [GenBank: AF234644.1] 1195/1227 T. aestivum cv. Cheyenne mRNA
2 34 [GenBank: M16064.1] 1187/1200 T. aestivum cv. Yamhill gene
3 183 [GenBank: M36999.1] 1088/1094 T. aestivum cv. Yamhill gene
4 14 [GenBank: FJ006605.1] 1005/1007 T. aestivum cv. Chinese Spring gene
5 27 [GenBank: FJ006695.1] 1139/1191 Aegilops speltoides gene
6 17 [GenBank: EF426565.1] 1048/1054 T. turgidum ssp. durum cv. Langdon gene
7 4 [GenBank: M13713.1] 1083/1087 T. aestivum cv. Yamhill gene
8 82 [GenBank: AF234644.1] 1083/1123 T. aestivum cv. Cheyenne mRNA
94 3 [GenBank: FJ006688.1] 848/908 Aegilops searsii gene
   [GenBank: FJ006686.1] 848/908 Aegilops searsii gene
10 103 [GenBank: M36999.1] 1024/1078 T. aestivum cv. Yamhill gene
115 3 [GenBank: EF151018.1] 668/668 T. aestivum cv. Chinese Spring mRNA
  1. 1 with best score by blastn against nr/nt database, no filters, no masks, last searched on 5/11/09.
  2. 2 includes seven ESTs assigned to both contigs #1 and #8.
  3. 3 includes nine ESTs assigned to both contigs #3 and 10.
  4. 4 contig is missing a portion of the 3' end of coding region.
  5. 5 contig is missing a portion of the 5' end of the coding region.