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Table 1 Transcriptional correlations between phenanthrene and other treatments.

From: Transcriptional responses to polycyclic aromatic hydrocarbon-induced stress in Arabidopsis thalianareveal the involvement of hormone and defense signaling pathways

Code

Treatment

Correlation

NASC

PHE

Phenanthrene (3 w, 3 w)

1.00

 

bot

Botrytis cinerea (4 w, 48 h)

0.72

167

pst

P. syringae patovar tomato (5 w, 24 h)

0.71

330

o3

Ozone (2 w, 6 h)

0.67

26

avr

P. syringae avrRpm1 (5 w, 24 h)

0.66

120

pha

P. syringae phaseolicola (5 w, 24 h)

0.64

120

oss

Osmotic stress (2 w, 24 h; shoot)

0.64

139

ps1

P. syringae DC3000 (5 w, 24 h)

0.63

120

sen

None; senescence (mid flowering; leaves)

0.62

52

pvi

P. syringae ES4326 (4 w, 48 h)

0.60

168

sa

Salicylic acid (1 w, 3 h)

0.55

192

eoi

Erysiphe orontii (5 w, 5 d)

0.52

169

oxs

Oxidative stress (2 w, 24 h; shoot)

0.51

139

ag3

AgNO3 (1 w, 3 h)

0.48

188

gts

Genotoxicity (2 w, 24 h; shoot)

0.46

142

uvs

UV radiation (2 w, 24 h; shoot)

0.42

144

tib

2,3,5-triiodobenzoic acid (TIBA; 1 w, 3 h)

0.36

186

pav

P. syringae ES4326 avrRpt2 (4 w, 48 h)

0.32

168

iaa

Indoleacetic acid (IAA; 1 w, 3 h)

0.27

175

mja

Methyl jasmonate (1 w, 3 h)

0.26

174

ga3

Gibberellic aid (1 w, 3 h)

0.20

177

aba

Abscisic acid (1 w, 3 h)

0.19

176

ctk

Cytokinin (3 w, 3 h)

0.18

181

acc

1-aminocycloprop. 1-carbox. acid (1 w, 3 h)

0.18

172

pac

Paclobutrazol (1 w, 12 h)

-0.01

185

avg

Aminoethoxyvinylglycine (1 w, 3 h)

-0.01

188

bra

Brassinolide (1 w, 3 h)

-0.03

178

css

Caesium-137 (shoot; 3 w, 2 w)

-0.07

324

  1. Correlations between microarray profiles of 1031 phenanthrene-responsive genes under phenanthrene treatment and 27 other stress and hormone treatments. Plant age in weeks and duration of treatment are given in parenthesis; whole plant tissue was analyzed if not otherwise indicated. Correlation represents Spearman correlation (ρ) with the phenanthrene treatment. NASC is the Nottingham Arabidopsis Stock Centre microarray reference number.