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Table 4 Haplotype-trait associations (P = 0.05) and percentage explained genetic variance (%Var) of the candidate genes' haplotypes

From: DNA polymorphisms and haplotype patterns of transcription factors involved in barley endosperm development are associated with key agronomic traits

Candidate gene1

Crude protein content

Starch content

Thousand-grain weight

Flowering time

Plant height

 

%Var

Significance2

%Var

Significance

%Var

Significance

%Var

Significance

%Var

Significance

BLZ1

2.65

0.050

-

-

-

-

3.28

0.031

3.05

0.036

BLZ2

-

-

-

-

4.01

0.027

-

-

-

-

BPBF

8.25

0.001

6.02

0.006

-

-

-

-

-

-

  1. 1 Only haplotypes with a frequency greater than 0.05 are considered, no association was detected between haplotypes of HvGAMYB and any of the five traits
  2. 2 Significance level of Wald-t test