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Table 3 BaMV coat protein accumulation in TRV-driven gene-silenced Nicotiana benthamiana plants.

From: Identification of differentially expressed genes induced by Bamboo mosaic virus infection in Nicotiana benthamianaby cDNA-amplified fragment length polymorphism

TDFa Expressionb Protein candidate CPc Significanced
ACCT13 + regulator of gene silencing [N. tabacum] 72 ± 3  
ACGT4 + thioredoxin h-like protein [N. tabacum] 181 ± 43 **
ACGT11-1 + plasma membrane polypeptide [N. tabacum] 172 ± 49 **
ACAG2-1 + NEP1-interacting protein 2 [Arabidopsis thaliana] 191 ± 14 ***
ACCA10 + AER [N. tabacum] 77 ± 32  
ACCT1-1 - CDK-activating kinase[Candida dubliniensis CD36] 197 ± 25 **
ACCT5-1 - lysine ketoglutarate reductaselysine trans-splicing [Zea mays] 74 ± 24  
ACAG8 - chloroplast carbonic anhydrase [N. benthamiana] 68 ± 14 *
ACGT2-1 - photosystem II 23 kDa polypeptide [N. tabacum] 149 ± 40 **
ACAG1 - ferredoxin--NADP(+) reductase [N. tabacum] 190 ± 24 **
ACGT12 - lipid transferase [N. tabacum] 42 ± 18 ***
ACTC5-1 - ribosomal protein L20 [N. tabacum] 73 ± 17  
ACCT3-1 - hypothetical protein [N. tabacum] 70 ± 30  
ACCA3 + mRNA C-7 [N. tabacum] 56 ± 26 **
ACGA3-1 + No significant match 107 ± 16  
  1. aTDF: transcript-derived fragment
  2. bExpression: up-regulated (+) or down-regulated (-) cDNA-AFLP signals detected in virus-infected leaves, compared to mock-infected leaves
  3. cCP: the coat protein accumulation levels of BaMV in knockdown plants
  4. dSignificance: Asterisks indicate statistically significant differences compared with the control plants (*p < 0.05, **p < 0.01, ***p < 0.001)
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