Skip to main content

Table 1 List of EST-based markers and functional annotation.

From: A molecular recombination map of Antirrhinum majus

Sequence number EST annotation Length in bp min. eValue
EM:AMA558924 thioredoxin peroxidase 723 1.0E-1.12106E-85
EM:AJ801757 proline-rich apg-like protein 670 1.0E-2.50815E-86
EM:AJ794773 o-linked c-transferase 758 1.0E-2.06855E-101
EM:AJ804794 histone h1 556 1.0E-1.27731E-27
EM:AJ794598 at4g20410-like protein 736 1.0E-1.80515E-107
EM:AJ805499 stearoyl-acyl carrier protein desaturase 481 1.0E-9.70457E-56
EM:X57295 TAP1 protein precursor 5280 1.0E-1.98821E-44
EM:AY072736 HIRZINA KNOX protein 1462 1.0E-0.0
EM:AJ802708 Eukaryotic translation initiation factor 6 630 1.0E-1.16373E-87
EM:AJ794444 mgc108135 protein 675 1.0E-6.11236E-80
EM:AJ802293 translational inhibitor protein 589 1.0E-1.37912E-65
EM:AJ803243 60 s ribosomal protein l18 731 1.0E-2.80747E-92
EM:AJ559267 heavy-metal-associated domain-containing protein 504 1.0E-2.98463E-13
EM:AJ790658 urease accessory protein g 561 1.0E-3.52407E-97
EM:AJ792971 gtp-binding protein 628 1.0E-1.89892E-82
EM:AJ560201 iron-sulfur cluster assembly protein 768 1.0E-3.45238E-59
EM:AJ620906 STYLOSA co-repressor 2865 1.0E-0.0
EM:AJ806659 atp-dependent clp protease proteolytic subunit 711 1.0E-1.54692E-116
EM:AJ560074 leucine rich repeat protein 754 1.0E-2.04947E-101
EM:AM422773 YABBY4 transcription factor 1395 1.0E-7.9976E-177
EM:X97639 cyclin-dependent kinase, CDC2a 1038 1.0E-2.78255E-170
EM:AJ806654 C2H2 zinc-finger protein 530 1.0E-4.79832E-31
EM:AM422772 YABBY2 transcription factor 1373 1.0E-3.22687E-114
EM:AJ568130 cyclic nucleotide-regulated ion channel 620 1.0E-3.55048E-94
EM:AJ568031 amino acid permease familyexpressed 1459 1.0E-1.38642E-78
EM:AJ800340 at3g04780 f7o18_27 721 1.0E-1.77924E-75
EM:AJ568062 chloroplast translation initiation factor 2 415 1.0E-4.51282E-45
EM:S53900 PLENA MADS-box transcription factor 1073 1.0E-1.61386E-120
EM:AJ801384 actin associated protein 538 1.0E-5.43416E-33
EM:AJ800042 multiple stress-responsive zinc-finger protein 781 1.0E-1.45489E-60
EM:AJ805889 centromere microtubule binding protein cbf5 692 1.0E-3.39584E-97
EM:AJ808934 transcription factor 884 1.0E-2.17962E-88
EM:AJ568063 polygalacturonase-inhibiting protein 734 1.0E-1.19729E-66
EM:AJ804237 histidinol dehydrogenase 634 1.0E-2.00488E-95
EM:AJ795662 flavonoid 3-o-glucosyltransferase 750 1.0E-9.60942E-83
EM:AJ800415 erwinia induced protein 2 615 1.0E-2.67616E-49
EM:AJ796551 Frigida 666 1.0E-5.06947E-39
EM:AJ796122 p-p-bond-hydrolysis-driven protein transmembrane transporter 747 1.0E-3.07514E-73
EM:AJ800197 atp-dependent protease clp atpase subunit 594 1.0E-3.10775E-69
EM:AJ559052 t-complex protein 1 epsilon tcp-1- 690 1.0E-2.62699E-116
EM:AJ803361 monodehydroascorbate reductase 730 1.0E-7.35389E-109
EM:AJ802640 isochorismatase hydrolase 779 1.0E-1.51824E-94
EM:AY223518 LIP1 apetala2-like transcription factor 1845 1.0E-0.0
EM:AJ805150 photoassimilate-responsive protein par-like protein 530 1.0E-7.5899E-61
EM:AJ620905 STYLOSA1 co-repressor 3123 1.0E-0.0
EM:AJ801986 at-rich element binding factor 3 590 1.0E-8.38628E-55
EM:X68831 GLOBOSA MADS-box transcription factor 6108 1.0E-5.69779E-27
EM:X76995 polygalacturonase-inhibiting protein 3545 1.0E-4.66003E-119
EM:AJ558819 psap psi-p ptac8 tmp14 (thylakoid membrane phosphoprotein of 14 kda) dna binding 762 1.0E-2.07028E-40
EM:AJ793550 trna-methyltransferase subunit 535 1.0E-7.89349E-61
EM:AJ620909 SEUSS3A co-repressor 3683 1.0E-0.0
EM:AJ800998 Transcription factor lim 710 1.0E-3.7918E-99
EM:AJ620910 seu3b protein 2004 1.0E-2.36396E-82
EM:AY451399 CRABSCLAW-like YABBY transcription factor 732 1.0E-1.78657E-70
EM:AJ794665 nuclear cap binding protein subunit 2 673 1.0E-1.25817E-85
EM:AJ802365 ---NA--- 583 1.0E-1.68821E-23
EM:AJ801224 ---NA--- 613 1.0E-2.33555E-13
EM:AJ794216 nuclear RNA binding 758 1.0E-1.84607E-33
EM:AJ794472 serine threonine protein kinase 746 1.0E-1.35578E-75
EM:AJ568099 pgr5-like a 1478 1.0E-9.46041E-75
EM:AJ791655 bzo2h3 (arabidopsis thaliana basic leucine zipper 63) dna binding transcription factor 758 1.0E-9.80266E-27
EM:AJ790549 immunophilin 566 1.0E-1.28799E-54
EM:M55525 FLORICAULA transcription factor 1545 1.0E-0.0
EM:AJ802861 ---NA--- 728 1.0E-1.22273E-47
EM:AJ799233 delta-12 oleate desaturase 736 1.0E-8.2567E-116
EM:AJ804300 protein 683 1.0E-6.22658E-88
EM:AJ803800 af319475_1 alpha-expansin 9 precursor 590 1.0E-5.56035E-91
EM:AJ803115 protein 654 1.0E-9.83593E-72
EM:AJ790136 tfIIb-related protein 677 1.0E-1.59963E-96
EM:AJ805759 eukaryotic translation initiation factor 6 689 1.0E-1.55443E-110
EM:AJ559280 tic20-like protein 710 1.0E-6.95853E-77
EM:AJ620907 SEUSS1 protein 3495 1.0E-0.0
EM:AJ789733 ---NA--- 675 1.0E-6.54566E-74
EM:AJ800463 tubulin alpha-6 chain 605 1.0E-4.42202E-40
EM:AJ791186 Glutaredoxin-like protein 684 1.0E-1.57483E-30
EM:AJ790836 b12 d protein 564 1.0E-1.21222E-36
EM:AJ794452 duf1230-containing protein 763 1.0E-1.97117E-91
EM:AJ793362 phosducin-like protein 3 578 1.0E-6.36625E-60
EM:Y16313 CYCLOIDEA TCP transcription factor 861 1.0E-1.34443E-129
EM:AY223519 LIP2 apetala2-like transcription factor 1914 1.0E-0.0
EM:AJ800866 polycomb protein ez1 507 1.0E-1.11628E-31
EM:AJ805209 rer1a protein 582 1.0E-1.72796E-60
EM:AJ568117 phenylalanine ammonia-lyase 619 1.0E-7.46548E-60
EM:AJ791765 microtubule motor 745 1.0E-7.82606E-45
EM:AJ808258 flu (fluorescent in blue light) binding 663 1.0E-2.25085E-39
EM:AJ793379 rpm1-interacting protein 4 580 1.0E-1.07793E-22
  1. The ESTs were automatically annotated using BLAST2GO. The corresponding EST annotation was performed using a minimal threshold of e-6. Those genes with high homology to genes with unknown function were annotated as NA. Sequences with known mutant phenotypes in Antirrhinum are given their Antirrhinum gene names.
\