Poplar Gene ID. | Functional Annotation | Microarray results | RT-qPCR validation | ||||
---|---|---|---|---|---|---|---|
EST (Genbank) | Populus trichocarpa Genome V 2.01 | E value | *POPTR BlastN **NCBI BlastX | q-value (%) | M (log2 fold difference) | M (log2 fold difference)2 | SD |
CN517570 | POPTR_0004s23850 | E-45 | *predicted protein | 3.065 | -0.261 | N/A | Â |
CN517617 | POPTR_0006s12510 | 0 | **s-adenosylmethionine synthase 6 | 2.384 | 0.333 | -0.833 | 0.453 |
CN517648 | POPTR_0005s11070 | E-120 | **Peroxidase (PO3) | 0.000 | -0.275 | 0.017 | 0.195 |
CN517711 | POPTR_0004s24390 | E-90 | *predicted protein | 3.065 | -0.213 | N/A | Â |
CN517879 | POPTR_0001s28710 | E-42 | **Serine/threonine protein kinase | 0.000 | -0.488 | -0.090 * | 0.693 |
CN518033 | POPTR_0010s14250 | 0 | *predicted protein | 3.065 | -0.364 | N/A | Â |
CN518196 | scaffold_6:22787285..22789257 | E-05 | **protein kinase | 2.258 | -0.179 | N/A | Â |
CN518487 | POPTR_0010s12680 | E-91 | **mitochondrial beta subunit of F1 ATP synthase (PtrAtpB) | 2.384 | 0.320 | N/A | Â |
CN518490 | POPTR_0004s22020 | E-53 | **Fasciclin-like AGP 10 | 3.065 | -0.545 | -0.678 * | 0.365 |
CN518917 | POPTR_0010s05180 | E-27 | **putative polygalacturonase, pectidase | 2.600 | -0.200 | N/A | Â |
CN518924 | POPTR_0015s00430 | E-41 | **Plastid-specific 30 S ribosomal protein 1 | 3.575 | -0.293 | N/A | Â |
CN518966 | POPTR_0003s13440 | E-73 | **progesterone 5-beta-reductase-A | 2.384 | 0.323 | N/A | Â |
CN519065 | POPTR_0008s14360 | E-171 | *Myoinositol oxygenase, Aldehyde reductase | 0.000 | 0.449 | 0.323 * | 0.838 |
CN519230 | POPTR_0015s03670 | 0 | *predicted protein | 2.258 | -0.272 | -0.044 * | 0.837 |
CN519263 | POPTR_0022s00750 | E-32 | **Lactoylglutathione lyase, Glyoxalase putative | 3.651 | -0.204 | N/A | Â |
CN519295 | POPTR_0012s14780 | E-30 | **Coatomer delta subunit | 3.065 | -0.266 | N/A | Â |
CN519368 | POPTR_0004s21650 | 0 | *phosphate-responsive 1 family protein | 0.000 | 0.567 | -0.246 | 0.404 |
CN519565 | POPTR_0001s22700 | E-55 | **leucine rich protein, Brassinosteroid insensitve 1-associated receptor kinase (BAK-1) | 2.768 | -0.314 | -0.710 * | 0.326 |
CN520095 | POPTR_0005s22210 | E-108 | **Oxidoreductase activity protein | 0.000 | 0.390 | -0.803 | 0.446 |
CN520368 | POPTR_0008s06940 | E-41 | **Cys-3-His zinc finger protein | 4.086 | -0.332 | -0.044 * | 0.619 |
CN520805 | POPTR_0009s02400 | E-93 | *leucine rich protein **Brassinosteroid insensitve 1-associated kinase repector, (BAK-1) | 0.000 | -0.203 | -0.424 * | 0.344 |
CN521180 | POPTR_0001s13540 | E-50 | **Lactoylglutathione lyase/glyoxalase 1 family protein | 0.000 | -0.281 | -0.287 * | 0.432 |
CN521321 | POPTR_0007s10200 | E-14 | **hydrolase, alpha/beta fold family protein | 2.200 | -0.227 | N/A | Â |
CN521367 | POPTR_0006s29050 | E-27 | **ABC1 family protein | 3.065 | -0.255 | N/A | Â |
CN521610 | POPTR_0009s12310 | E-86 | *Predicted protein | 4.086 | -0.520 | 0.059 | 0.591 |
CN521704 | POPTR_0010s24930 | E-21 | **DnaJ homolog | 3.651 | -0.233 | N/A | Â |
CN521866 | POPTR_0011s04190 | E-49 | **Armadillo/beta-catenin repeat family protein | 0.000 | -0.243 | N/A | Â |
CN522073 | POPTR_0017s06630 | E-29 | **EXS family protein | 0.000 | -0.259 | N/A | Â |
CN522222 | POPTR_0009s10300 | E-142 | *C3HC4 ring Zn-finger, Anaphase-promoting complex (APC), subunit 11 | 3.065 | -0.258 | N/A | Â |
CN522424 | POPTR_0008s23260 | E-109 | *Ethylene response factor (ERF35) Pt-RAP2.4 | 2.768 | -0.358 | N/A | Â |
CN522566 | POPTR_0005s12510 | E-163 | *Unknown function | 0.000 | -0.407 | N/A | Â |
CN522696 | POPTR_0012s09650 | E-81 | **4-coumarate-coa ligase (Ptr4CL9) | 2.768 | -0.214 | N/A | Â |
CN522933 | POPTR_0005s19400 | E-21 | **Branched-chain amino acid aminotransferase, putative | 0.000 | -0.209 | N/A | Â |
CN522970 | POPTR_0005s27930 | E-14 | **bZIP transcription factor family protein | 3.651 | -0.297 | -0.237 * | 0.379 |
CN523006 | POPTR_0006s19770 | E-48 | **phytocyanin-like arabinogalactan-protein | 0.000 | 0.613 | -0.890 | 0.762 |
CN523531 | POPTR_0006s23940 | E-104 | **phytanoyl-CoA hydroxylase (PhyH) glycoproteins AGP19 | 3.065 | -0.299 | -0.330 * | 0.484 |
CN521717 | POPTR_0002s14730 | E-26 | **Transketolase | 0.000 | 0.261 | N/A | Â |
CN523609 | POPTR_0011s13810 | E-126 | *Translation initiation factor activity SUI1 | 3.065 | -0.281 | -0.192 * | 0.560 |
CN522357 | POPTR_0007s08390 | E-136 | **Elongation factor EF-2 | 3.065 | -0.336 | -0.533 * | 0.427 |
HO702741 | POPTR_0007s12770 | 0 | *Unknown function | 0.000 | -0.397 | -0.679 * | 0.300 |
HO702768 | POPTR_0009s13750 | E-28 | **Farnesylated protein | 2.145 | -0.388 | N/A | Â |
HO702822 | POPTR_0010s00900 | E-37 | **AP2/Ethylene response factor domain-containing transcription facctor | 3.651 | -0.517 | -1.034 | 0.860 |
HO702830 | POPTR_0010s01590 | E-160 | *Late embryogenesis abundant protein 3 | 3.065 | -0.868 | -0.983 * | 0.561 |
HO702837 | POPTR_0015s06030 | E-117 | *Unknown fonction | 3.065 | -0.234 | N/A | Â |
HO702874 | POPTR_0010s11840 | E-66 | *DUF26 | 2.600 | -0.240 | N/A | Â |
HO702885 | POPTR_0002s20260 | E-61 | **Ethylene receptor 1 (ETR1) | 3.651 | -0.280 | N/A | Â |
HO702895 | scaffold_20:856315..856454 | E-45 | *Unknown function | 0.000 | -0.360 | N/A | Â |
HO703041 | POPTR_0008s20950 | E-128 | *DUF588, Nitrate, Iron, Fromate dehydrogenase, integral membrane protein | 3.065 | -0.914 | N/A | Â |