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Table 1 List of analyzed Eleocharis species and measured values

From: Correlated evolution of LTR retrotransposons and genome size in the genus eleocharis

 

2C [pg]

2n1)

2C/2n [Mbp]

LTR retrotransposon densities (real-time PCR)

LTR retrotransposon densities (dot blot)

    

Ty1-copia

Ty3-gypsy

Helos1

Ty1-copia

Ty3-gypsy

Helos1

E. acicularis

2.472)

20

121

1507

158

4

36671

1859

686

E. austriaca

4.84

16

296

4290

101

622

n.a.

n.a.

n.a.

E. carniolica

2.58

20

126

1971

159

133

29843

2064

801

E. cellulosa

0.84

n.a.

n.a.

1236

193

10

9875

918

300

E. eryhtropoda

5.48

18

298

n.a.

n.a.

n.a.

n.a.

n.a.

n.a.

E. interstincta

n.a.

40/52

n.a.

n.a.

n.a.

n.a.

n.a.

n.a.

n.a.

E. macrostachya

9.80

38

253

2217

119

181

n.a.

n.a.

n.a.

E. mamillata

4.60

16

282

3928

89

677

85510

1279

7186

E. ovata

1.40

10

137

1007

174

19

35417

1517

816

E. palustris

4.20

16

257

3464

113

435

79966

1445

8132

E. quinqueflora

1.12

136

8

1112

241

2

n.a.

n.a.

n.a.

E. sterneri

18.00

74

238

2217

107

199

n.a.

n.a.

n.a.

E. uniglumis

10.20

46

217

3899

149

320

81196

2845

5634

E. vigens

8.74

36

238

2507

111

243

n.a.

n.a.

n.a.

E. waltersii

11.00

39

276

3319

131

386

70679

900

6735

E. xyridiformis

5.50

18

299

2739

183

291

92801

1792

6676

   Significance of phylogenetic signal

-

*

**

*

*

**

**

-

**

  1. 1) Chromosome numbers were taken from previous studies ([68]: E. palustris, E. waltersii; [49]: E. sterneri because of sample identity; [69]: E. quinqueflora because of population identity; [35]: E. interstincta). For the remaining samples, chromosome numbers were counted by O. Rotreklová and P. Bureš (unpublished data).
  2. 2) An average of seven samples, each representing a different population (see Results and Discussion).
  3. * p < 0.05; ** p < 0.01