Skip to main content

Table 2 Conservation of key residues for Cyclosporin A binding/PPIase activity in O. sativa cyclophilins (OsCYPs) and comparison with those of A. thaliana cyclophilins.

From: Classification of rice (Oryza satival. japonica nipponbare) immunophilins (FKBPs, CYPs) and expression patterns under water stress

OsCYPs/AtCYPs

Residues for Cyclosporin A binding/PPIase activity in human cyclophilinA

(aa position)

Conserveda

(%)

Similarityb

(%)

  

54

55

60

111

113

121

126

  

hCYPA

H

R

F

Q

F

W

H

  

OsCYP17

 

S

Q

I

"

"

"

Y

43/-

 

OsCYP18-1

: AtCYP18-1

"

"

"

"

"

H

Y

71/71

100

OsCYP18-2

: AtCYP18-2

"

"

"

"

"

S

"

86/86

100

 

: AtCYP18-3

"

"

"

"

"

"

"

-/100

 

OsCYP18-4

: AtCYP18-4

"

"

"

"

"

"

"

-/100

 
 

: AtCYP19-1

"

"

"

"

"

"

"

-/100

 

OsCYP19-2

: AtCYP19-2

"

"

"

"

"

"

"

100/100

100

OsCYP19-3

: AtCYP19-3

"

"

"

"

"

"

"

100/100

100

OsCYP19-4

: AtCYP19-4

"

"

"

"

"

R/"

"

88/100

88

OsCYP20-1

: AtCYP20-1

"

"

"

"

"

"

"

100/100

100

OsCYP20-2

: AtCYP20-2

"

"

"

"

"

"

"

100/100

100

OsCYP20-3

: AtCYP20-3

"

"

"

"

"

"

"

100/100

100

OsCYP21-1

: AtCYP21-1

"

"

"

"

"

"

"

100/100

100

 

: AtCYP21-2

"

"

"

"

"

"

"

-/100

 
 

: AtCYP21-3

S

"

K

E

"

D

L

-/29

 

OsCYP21-4

: AtCYP21-4

R/Q

H/"

F/Y

D/E

L

D

L

0/14

43

OsCYP22

: AtCYP22

"

"

"

"

"

"

"

100/100

100

OsCYP23

: AtCYP23

F

"

"

S

S

H

Y

29/29

100

 

: AtCYP26-1

D

H

L

"

O

Q

"

-/29

 

OsCYP26-2

: AtCYP26-2

V

K

Y

E

V

E

A/V

0/0

86

OsCYP28

: AtCYP28

"

K

Q

E

L

E/Q

N

14/0

86

OsCYP37

: AtCYP37

Y

T

L

"

"

F

F

29/29

100

OsCYP38

: AtCYP38

F

"

"

"

"

I

Y

57/57

100

OsCYP40a

: AtCYP40

"

"

I

"

"

H

"

71/71

100

OsCYP40b

: AtCYP40

"

"

I

"

"

H

"

71/71

100

OsCYP57

: AtCYP57

"

"

"

"

"

"

N/"

86/100

86

OsCYP59a

: AtCYP59

R/Q

K

Q

"

Y

Y

"

29/29

86

OsCYP59b

: AtCYP59

R/Q

K

Q

"

Y

Y

"

29/29

86

OsCYP63

: AtCYP63

"

F/"

M/"

"

"

H

"

57/86

71

OsCYP65

: AtCYP65

"

"

"

"

"

H

"

86/86

100

OsCYP71

: AtCYP71

"

"

"

"

"

"

"

100/100

100

OsCYP95

: AtCYP95

"

"

"

"/H

"/H

R/Q

S/N

57/43

43

Conservedc (%)

71/77

79/79

72/69

82/79

71/71

38/52

62/69

  
  1. a% identity of rice/Arabidopsis CYP compared to human cyclophilin A. b% similarity between rice and Arabidopsis CYP. C% conservation of amino acid in rice/Arabidopsis CYP