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Table 2 The fifty most abundant unigenes in the opium poppy 454 G S-F L X Titanium pyrosequencing database.

From: Integration of deep transcriptome and proteome analyses reveals the components of alkaloid metabolism in opium poppy cell cultures

Rank

Number of reads

Annotation

Protein score*

Plant species

Accession number

1

3165

Senescence-associated protein

859

Pisum sativum

Q9AVH2_PEA

2

1579

S-Adenosylmethionine synthetase

609

Nicotiana suaveolens

Q069K3_9SOLA

3

1579

S-Adenosylmethionine synthetase

1846

Solanum tuberosum

METK2_SOLTU

4

1323

Multiprotein bridging factor

600

Solanum tuberosum

Q9LL86_SOLTU

5

1220

Heat shock protein

2973

Cucurbita maxima

Q8GSN4_CUCMA

6

1176

Chitinase, class IV

903

Nepenthes alata

A9ZMK1_NEPAL

7

1154

Berberine bridge enzyme

2698

Papaver somniferum

RETO_PAPSO

8

1120

60 S ribosomal protein L6

827

Mesembryanthemum crystallinum

RL6_MESCR

9

1106

Elongation factor 1α

2227

Lilium longiflorum

Q9SPA1_LILLO

10

1009

Beta lactamase

1388

Zea mays

Q285M4_MAIZE

11

978

Heat shock protein 90

2846

Nicotiana tabacum

Q14TB1_TOBAC

12

950

40 S ribosomal protein S9

862

Solanum demissum

Q60CZ2_SOLDE

13

863

Methionine synthase

3422

Carica papaya

A6YGE7_CARPA

14

855

Coclaurine N-methyltransferase

1351

Papaver somniferum

Q7XB08_PAPSO

15

847

Polyphenol oxidase

1498

Malus domestica

PPO_MALDO

16

844

Fructose-bisphosphate aldolase

1644

Solanum tuberosum

Q2PYX3_SOLTU

17

841

Nodulin protein

457

Oryza sativa subsp japonica

Q5VRN2_ORYSJ

18

807

Proteasome component protein

69

Medicago truncatula

A2Q5C5_MEDTR

19

757

Nectarin IV/xyloglucanase inhibitor

1484

Nicotiana langsdorffii × N. sanderae

Q3KU27_NICLS

20

735

Cellulose synthase

1669

Zea mays

B6SW15_MAIZE

21

729

Luminal-binding protein 5

2728

Nicotiana tabacum

BIP5_TOBAC

22

717

Elongation factor 1α

2231

Prunus persica

B6V864_PRUPE

23

686

Uncharacterized protein

864

Arabidopsis thaliana

Q9LZN8_ARATH

24

680

Peroxidase

1154

Medicago truncatula

A4UN76_MEDTR

25

652

Adenosylhomocysteinase

2300

Medicago sativa

SAHH_MEDSA

26

647

Pathogenesis-related protein

383

Solanum lycopersicum

Q53U35_SOLLC

27

630

Norcoclaurine synthase 1

1114

Papaver somniferum

Q4QTJ2_PAPSO

28

621

Sterol dehydrogenase

1133

Arabidopsis thaliana

O22856_ARATH

29

572

ADP ribosylation factor

936

Daucus carota

Q38JU3_DAUCA

30

569

Pathogenesis-related protein

376

Solanum lycopersicum

Q53U35_SOLLC

31

534

Tetrahydroprotoberberine N-methyltransferase

1780

P apaver somniferum

Q108P1_PAPSO

32

528

Polyubiquitin

740

Euphorbia esula

Q9M5X0_EUPES

33

507

ABC transporter

1930

Oryza sativa subsp japonica

Q84ZB2_ORYSJ

34

506

Polyphenol oxidase

1866

Annona cherimola

A0A168_ANNCH

35

479

S-Adenosylmethionine synthetase

1928

Vitis vinifera

METK2_VITVI

36

468

Lipid transfer protein

239

Oryza sativa subsp japonica

Q6L4H1_ORYSJ

37

465

Glycoprotein

515

Daucus carota

Q05929_DAUCA

38

463

β-D-glucosidase

2574

Gossypium hirsutum

Q7XAS3_GOSHI

39

456

Cysteine proteinase

1690

Elaeis guineensis var. tenera

A6N8F8_ELAGV

40

449

Ripening-regulated protein

857

Oryza sativa subsp japonica

Q6ZJI2_ORYSJ

41

448

Stylopine synthase

1996

Eschscholzia californica

Q50LH3_ESCCA

42

436

Glycoprotein

506

Daucus carota

Q05929_DAUCA

43

435

Calreticulin

1738

Berberis stolonifera

CALR_BERST

44

434

FAD-dependent oxidoreductase

1206

Arabidopsis thaliana

O64743_ARATH

45

434

Xyloglucanase inhibitor

1485

Solanum tuberosum

Q7XJE7_SOLTU

46

434

Uncharacterized protein

1245

Arabidopsis thaliana

Q8VZ33_ARATH

47

422

Tetrahydroprotoberberine N- methyltransferase

1413

Papaver somniferum

Q108P1_PAPSO

48

419

ATPase, AAA-type

1486

Arabidopsis thaliana

Q9FKM3_ARATH

49

415

Spindle disassembly protein

2459

Nicotiana tabacum

Q1G0Z1_TOBAC

50

409

Pathogenesis-related protein

383

Solanum lycopersicum

Q53U35_SOLLC

  1. * Refers to a measure of similarity between a previously characterized protein with the listed annotation and an amino acid sequence translated from the contig. A high score indicates substantial amino acid identity between the two proteins.