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Table 1 Gene bank accession numbers and primer sequences used in real-time PCR of differentially expressed ESTs

From: Identification of genes associated with growth cessation and bud dormancy entrance using a dormancy-incapable tree mutant

Gene name

EST bank accession #

 

Forward (F) and reverse (R) primer sequence

Desiccation-related protein, putative

GE653173

F

5'-AGGGCTCGACGATATCAGTCC-3'

  

R

5'-TGCATACGGGTCAAATGCAGG-3'

Amidase family protein

GE653170

F

5'-CGGTTCGATCCTTGGCAGAC-3'

  

R

5'-TCGACACGGCTGCAAATGGAG-3'

Deoxynucleoside kinase family protein

GE653171

F

5'-AGGAGGACAGCTCGAACTCAG-3'

  

R

5'-GCATACCTCTGCGGCTCAGC-3'

Auxin-binding protein ABP20 precursor

GE653207

F

5'-AGCCTCACCTCCATTGACTTGG-3'

  

R

5'-TGTTGCTCAGTTTCCTGGTGTGA-3'

Amino acid transporter family protein

GE653321

F

5'-GGCTTCACCCATGACATCACC-3'

  

R

5'-CTGGAATTATGAGCCTGCCTGC-3'

Glycoside hydrolase, family 18

GE653328

F

5'-CAGTCCACCACTCCCATCACTG-3'

  

R

5'-GCTTCCATTGCTCCCTTCGATG-3'

ATP sulfurylase 1

GE653245

F

5'-ACAAGACGCAATGCTGATGCTG-3'

  

R

5'-ACCACAGTCGTCTCAGGATCAAG-3'

KEG (KEEP ON GOING) protein

GE653332

F

5'-ACCCGTTCTATTTCCGATGCCT-3'

  

R

5'-TCAGTTTCAACTCCAACCCACCA-3'

Phosphatidylinositol 3- and 4-kinase family protein

GE653311

F

5'-GGGTTGGGGAGACAGGTTTCA-3'

  

R

5'-AGTCCCATGATCACTGGCATCA-3'

PRH75 (DEAD-box helicase)

GE653257

F

5'-TGTAGCCAGCAGCCTTAGCAAG-3'

  

R

5'-GCCAGTTGATGTTGCCAAAGCAG-3'

Zinc ion binding/LIM

GE653319

F

5'-AGAAGAGGATGAGGAGGAAGACG-3'

  

R

5'-GTTGTTGACAGGGTCGATTCTGG-3'

ATP-binding cassette transporter MRP6

GE653330

F

5'-CTGGGATTGTGGGTAGAACTGG-3'

  

R

5'-CCTTCAAACATGGTTGGGTCCTG-3'

Unknown1

GE653303

F

5'-CTCTCTGTGCTTCTCTCTCCTCA-3'

  

R

5'-TCCAGATTAACTCAGGGAGAAACCAG-3'

Late embryogenesis abundant (LEA)

GE653244

F

5'-TTCAAATTCTCCGGGGGTCG-3'

  

R

5'-TTCCAGGCCATCTTCCACGG-3'

Metallothionein-like protein

GE653329

F

5'-TCCACCAATCAACAAACACCTCAC-3'

  

R

5'-TAGCAAGTAATCTATGCGTGTGTGG-3'

Pathogenesis-related protein 1a (PR-1a)

GE653248

F

5'-CGACTGCAATCTTGTCCACTCTGG-3'

  

R

5'-ACCTCCACTGTTGCACCTCAC-3'

Dormancy associated MADS-box gene 1 (PpDAM1)

GE653327

F

5'-CAGAGGGCAAGCAACTACCAC-3'

  

R

5'-CCAGAGAAATTATGGAAGCCCCA-3'

Dormancy associated MADS-box gene 6 (PpDAM6)

GE653238

F

5'-CCAACAACCAGTTAAGGCAGAAGA-3'

  

R

5'-GGAAGCCCCAGTTTGAGAGA-3'

Epicotyl-specific tissue protein

GE653203

F

5'-CACCAAAAGAGAAAGCCGACTGC-3'

  

R

5'-TCAACCTCAACGTCAACCTCAAC-3'

RD22 (dehydration-responsive) precursor

GE653312

F

5'-GAACCCACACAAGATTATCAGCAGG-3'

  

R

5'-TTCTACTGCCACAGCCAGCA-3'

Unknown2

GE653334

F

5'-ATGGCAAACCACCAAGCACTCA-3'

  

R

5'-GTAGAGGAGCCTTGATTGGAGGAG-3'

Unknown3

GE653309

F

5'-AAGTTGTCCATCCCAACACATTCG-3'

  

R

5'-GCGAGGACATCTCTGGCAATAAGA-3'

Unknown4

GE653307

F

5'-TCCTCAACGAACAGACGGAACTC-3'

  

R

5'-TGGTGGTCTTGGAAATGCTGGT-3'