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Table 5 List of Arabidopsis and soybean P450 genes and orthologues with known functions.

From: Whole genome co-expression analysis of soybean cytochrome P450 genes identifies nodulation-specific P450 monooxygenases

AGI locus

Arabidopsis Gene

Soybean orthologue

Percentage Identity

Function in Arabidopsis

Reference -Arabidopsis function

At1g11680

CYP51A2

CYP51G1

80.9

Obtusifoliol 14α-demethylase

(Kushiro et al. 2001); (Kim et al. 2005b)

At2g30770

CYP71A13

CYP71A9

37.9

Conversion of indole-3-acetaldoxime, camalexin biosynthesis

(Nafisi et al. 2007)

At3g26830

CYP71B15

CYP83E8

 

Conversion of s-dihydrocamalexic acid to camalexin

(Bottcher et al. 2009); (Zhou et al. 1999)

At1g17060

CYP72C1

CYP72A69

44.3

Exact substrate not identified

(Nakamura et al. 2005); (Takahashi et al. 2005)

At2g30490

CYP73A5

CYP73A11

84.4

Cinnamic acid 4-hydroxylase (t-CAH)

(Mizutani et al. 1997)

At5g42650

CYP74A

CYP74A1

56.4

Allene oxide synthase (AOS)JA

(Laudert et al. 1996); (Park et al. 2002)

At4g15440

CYP74B2

CYP74B15

60.2

Hydroperoxide lyase (HPL) JA

(Bate et al. 1998)

At5g07990

CYP75B1

CYP75B43

52.6

3′-hydroxylase for narigenin, dihydrokaempferol (F3′H)

(Schoenbohm et al. 2000)

At5g04630

CYP77A4

CYP77A3/A12

68.1

Catalyze the formation of three mono-epoxides of alpha-linolenic acid

(Sauveplane et al. 2009)

At3g10570

CYP77A6

CYP77A12/A12

65

Chain hydroxylase - for cutin synthesis for morphology of flower

(Li-Beisson et al. 2009)

At1g13710

CYP78A5

CYP78A72

62.8

KLU control organ size, control leaf growth

(Wang et al. 2008); (Anastasiou et al. 2007)

At5g05260

CYP79A2

CYP79D17

49.1

Conversion of phenylalanine to oxime

(Whittstock and Halkier 2000)

At4g39950

CYP79B2

CYP79D21

51.1

Conversion of tryptophan, tryptophan analogs to oxime

(Hull et al. 2000); (Mikkelsen et al. 2000)

At2g22330

CYP79B3

CYP79D21

50.9

Conversion of tryptophan to oxime

(Hull et al. 2000)

At1g16410

CYP79F1

CYP79D17/21

40.7

Mono to hexahomomethionine in synthesis of aliphatic glucosinolates

(Hansen et al. 2001); (Reintanz et al. 2001); (Chen et al. 2003)

At1g16400

CYP79F2

CYP79D17/22

40.2

Long chain penta and hexahomomethionine in synthesis of long chain aliphatic glucosinolates

(Reintanz et al. 2001); (Chen et al. 2003)

At5g57220

CYP81F2

CYP82A3

47.6

Conversion of indole-3-yl-methyl to 4-hydroxy-indole-3-yl-methyl glucosinolate,

(Bednarek et al. 2009); (Pfalz et al. 2009)

At4g13770

CYP83A1

CYP83E8/CYP736A29

37

Oxidation of methionine-derived oximes;

(Bak and Feyereisen 2001); (Naur et al. 2003)

At4g31500

CYP83B1

CYP83E8/CYP736A30

45

Oxidation of indole-3-acetaldoxime

(Bak et al. 2001); (Naur et al. 2003)

At4g36220

CYP84A1

CYP8438/39/21

73.4

5-hydroxylase for coniferaldehyde, coniferyl alcohol and ferulic acid (F5H)

(Ruegger et al. 1999); (Humphreys et al. 1999)

At5g38970

CYP85A1

CYP85A12

68.9

C6-oxidase for 6-deoxycastasterone, other steroids

(Shimada et al. 2001); (Shimada et al. 2003)

At3g30180

CYP85A2

CYP85A13

70.3

C6-oxidase for 6-deoxycastasterone, other steroids;Conversion of castasterone to brassinolide

(Shimada et al. 2003); (Nomura et al. 2005)

At5g58860

CYP86A1

CYP86A37

72.8

ω-hydroxylase for satur. and unsat. C12 to C18 fatty acids

(Benveniste et al. 1998)

At4g00360

CYP86A2

CYP86A66

71.2

ω-hydroxylase for satur. and unsat. C12 to C18 fatty acids

(Duan and Schuler 2005); (Xiao et al. 2004)

At2g45970

CYP86A8

CYP86A66/67

76.4

ω-hydroxylase for satur. and unsatur. C12 to C18 fatty acids

(Wellesen et al. 2001)

At5g23190

CYP86B1

CYP86B9/10/11

69.5

C22 and C24 fatty acids, accumulated in the suberin polyester.

(Compagnon et al. 2009)

At1g05160

CYP88A3

CYP88A11/25

63.5

Multifunctional ent-kaurenoic acid oxidase

(Helliwell et al. 2001)

At2g32440

CYP88A4

CYP88A26

53.2

Multifunctional ent-kaurenoic acid oxidase

(Helliwell et al. 2001)

At5g05690

CYP90A1

CYP90A14/23/24

75.8

23α-hydroxylase for 6-oxo-cathasterone

(Szekeres et al. 1996)

At3g50660

CYP90B1

CYP90B15/18/17

71.3

22α-hydroxylase for 6-oxo-campestanol, campesterol and cholesterol

(Choe et al. 1998); (Fujita et al. 2006)

At4g36380

CYP90C1

CYP90C8/9/10

55.3

Conversion of typhasterol to castasterone, C-23 hydroxylation

(Ohinishi et al.); (Kim et al. 2005a)

At3g13730

CYP90D1

CYP90D12/13

61.9

Exact substrate in downstream BR synthesis not identified

(Kim et al. 2005a); (Greer et al. 2007); (Ohinishi et al. 2006)

At1g57750

CYP96A15

CYP94B13

42.4

Formation of secondary alcohols and ketones in cuticular wax of stem, acyl CoA reductase

(Greer et al. 2007)

At1g31800

CYP97A3

CYP97A10/19

70.7

β −ring hydroxylase on carotenes

(Kim and DellaPenna 2006)

At3g53130

CYP97C1

CYP97A16/17

79

ε −ring hydroxylase on carotenes

(Tian et al. 2004)

At2g40890

CYP98A3

CYP98A2/47

80

3′-hydroxylase for p-coumaryl shikimic/quinic acids (C3′H)

(Schoch et al. 2001); (Kai et al. 2006)

At5g25900

CYP701A3

CYP701A25/16

61.2

Multifunctional ent-kaurene oxidase

(Helliwell et al. 1998)

At1g01280

CYP703A2

CYP703A8

74.9

Sporopollenin synthesis, pollen development

(Morant et al. 2007)

At1g69500

CYP704B1

CYP704B28

75.5

Fatty acid -sporopollenin biosynthesis -pollen

(Dobritsa et al. 2009)

At4g19230

CYP707A1

CYP707A16

68.4

8′-hydroxylase for ABA inactivation

(Saito et al. 2004); (Kushiro et al. 2004)

At2g29090

CYP707A2

CYP707A45

61.9

8′-hydroxylase for ABA inactivation, Enhancement of ABA catabolism

(Saito et al. 2004); (Kushiro et al. 2004)

At5g45340

CYP707A3

CYP707A16/56

71.6

8′-hydroxylase for ABA inactivation

(Saito et al. 2004); (Kushiro et al. 2004)

At3g19270

CYP707A4

CYP707A53/59

65.1

8′-hydroxylase for ABA inactivation

(Saito et al. 2004); (Kushiro et al. 2004)

At2g34500

CYP710A1

CYP710A22/23

66.3

C-22 desaturase for β-sitosterol

(Morikawa et al. 2006)

At2g34490

CYP710A2

CYP710A22/24

62

C-22 desaturase on 24-epi-campesterol and β-sitosterol

(Morikawa et al. 2006)

At2g26170

CYP711A1

CYP711A23/24/25/26

70.6

Caretnoid,core phenylpropanoid metabolism

(Booker et al. 2005)

At2g26710

CYP734A1

CYP734A17/20/21

76.9

26-hydroxylase for brassinolide and castasterone

(Neff et al. 1999)

 

Soybean gene

Arabidopsis orthologue

Percentage identity

Function in soybean

Reference-Soybean function

 

CYP93C1

CYP93A41

40.9

Isoflavone synthase (IFS1)

(Jung et al. 2000)

 

CYP93C5

CYP93A41

40.3

Isoflavone synthase (IFS2)

(Jung et al. 2000)

 

CYP71D09

CYP71B34

39.1

Flavonoid 6-hydroxylase

(Latunde-Dada et al. 2001)

 

CYP73A11

CYP73A5

84.4

Cinnamate 4-hydroxylase

(Schopfer et al. 1998)

 

CYP93A1

  

Dihydroxypterocarpan 6a-hydroxylase (D6aH)

(Schopfer and Ebel 1998); (Schopfer et al. 1998)

 

CYP71A10

  

Metabolism of phenylurea herbicides

(Siminszky et al. 1999)