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Table 4 Co-expression analysis of selected soybean P450 genes.

From: Whole genome co-expression analysis of soybean cytochrome P450 genes identifies nodulation-specific P450 monooxygenases

Soybean Gene

Co-expressed genes

r value

CYP93C5-IFS1

  
 

Isoflavone synthase 1

1

 

Chalcone isomerase 1B2

0.91

 

Chalcone isomerase 1B1

0.87

 

Peroxidase, pathogen-induced

0.85

 

Copper amino oxidase

0.82

 

NAC domain protein

0.81

 

Peroxidase (PC7)

0.80

 

Peroxidase precursor (GMIPER1)

0.79

 

MYB transcription factor MYB67

0.79

 

Chalcone isomerase 2

0.79

 

NORK protein

0.79

 

KNT1

0.78

 

Transcription factor bZIP42

0.78

 

Plastid glucose-6-phosphate

0.77

 

Kunitz trypsin inhibitor p20-1-like protein

0.77

 

Dof3

0.76

 

Chalcone isomerase

0.76

 

Glutathione S-transferase GST 17

0.75

CYP728H1

  
 

CYP728H1

1

 

2'-hydroxy isoflavone/dihydroflavonol reductase homolog

0.92

 

4-coumarate:CoA ligase isoenzyme 2

0.90

 

Cytochrome P450 (CYP98A2)

0.86

 

RecA/Rad51/DMC1-like protein

0.83

 

Peroxidase

0.81

 

Endo-xyloglucan transferase

0.80

 

bZIP transcription factor bZIP17

0.79

 

Essex desiccation protectant protein Lea14 homolog

0.79

 

NAC domain protein (NAC18)

0.79

 

WD-repeat cell cycle regulatory protein

0.79

 

4-coumarate:coenzyme A ligase

0.79

 

31 kDa protein

0.78

 

Transcription factor bZIP18

0.77

 

Hydroxyproline-rich glycoprotein (sbHRGP2) mRNA, 3' end

0.76

 

Early nodulin

0.76

 

Protease inhibitor

0.76

 

Wee1

0.76

CYP736A32/34

  
 

CYP736A32//CYP736A34

1

 

Lectin

0.93

 

SOS2-like protein kinase

0.92

 

Cultivar Wenfeng7 purple acid phosphatase-like protein (Pap3)

0.91

 

Lipoxygenase L-5

0.88

 

Cysteine proteinase

0.88

 

Peroxisomal ascorbate peroxidase

0.88

 

Thiol protease isoform B

0.86

 

Phosphoglycerate mutase-like protein

0.86

 

Coronatine-insensitive 1

0.84

 

Catalase (cat4)

0.83

 

Sorbitol-like transporter

0.83

 

MYB transcription factor MYB48

0.82

 

Phosphoenolpyruvate carboxylase

0.82

 

Indole-3-acetic acid induced protein ARG-2 homolog

0.81

 

Lipoxygenase (lox7)

0.79

 

WRKY39 protein

0.77

 

Glutathione S-transferase GST 8

0.77

 

Mitogen-activated protein kinase 1 (MAPK1)

0.76

 

Ribulose-1,5-bisphosphate carboxylase small subunit

0.76

 

Clone pSXET1a xyloglucan endotransglycosylase precursor (XET1)

0.76

 

SOC1

0.76

 

OAS-TL3 cysteine synthase

0.76

 

WRKY23 (WRKY23)

0.76

 

Nitrate reductase (NiR)

0.75

 

NAC domain protein

0.75

 

bZIP transcription factor bZIP105

0.74

 

Allene oxide synthase (AOS2)

0.74

 

Chalcone synthase 1

0.72

 

CYP75B23v1 (sf3'h1)

0.70

  1. Selected P450 genes and their co-expressed genes are listed with Pearson correlation coefficient (r value >0.7)