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Table 1 Nucleotide diversity of VvDXS in grapevine

From: A candidate gene association study on muscat flavor in grapevine (Vitis viniferaL.)

Parameters Overall Coding/non coding
Varieties 148  
Genomic ATG-TAG (protein coding region) 4790 bp  
Full-ORF cDNA 2151 bp  
Predicted protein 716 aa  
Exons 10  
Introns 9  
Number of polymorphic sites 101  
SNPs 95 25/70
INDELS 7 0/7
Frequency of SNPs 1 per 51 bp 1 per 86/1 per 38
Frequency of INDELS 1 per 670 bp -/1 per 372 bp
Synonymous changes 15  
Non-synonymous changes 10  
Synonymous vs non-synonymous mutations 1.5:1