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Figure 6 | BMC Plant Biology

Figure 6

From: Functional Annotation, Genome Organization and Phylogeny of the Grapevine (Vitis vinifera) Terpene Synthase Gene Family Based on Genome Assembly, FLcDNA Cloning, and Enzyme Assays

Figure 6

Phylogeny of the TPS-b subfamily. Maximum likelihood analysis of the V. vinifera TPS-b subfamily. Bootstrap values supported by ≥ 50% are designated * and those with values ≥ 80%are indicated with ^. TPS characterized in this paper are in teal and include VvGwPhe = (+)-α-phellandrene syn, VvPNpPin = (+)-α-pinene syn, VvGwbOci &VvCSbOci = (E)-β-ocimene syn, VvCSEbOcM = (E)-β-ocimene/myrcene syn, VvGwEbOciF = (E)-β-ocimene/(E,E)-α-farnesene syn, and VvPNRLin = (3R)-linalool syn. VvTPS predicted from the 12-fold genome sequence assembly are in purple. Previously cloned VvTPS are in brown. TPS predicted by sequencing of the heterozygous Pinot noir are labeled with GenBank accession numbers (CAN....). Abbreviations are as follows: CspaPS = Cannabis sativa (+)-α-pinene syn (ABI21838), LaRLin = Lavandula angustifolia (3R)-linalool syn (ABD77417), CtGerS = Cinnamomum tenuipile geraniol syn (CAD29734), VvaTer1 = V. vinifera (-)-α-terpineol syn (AAS79351), VvaTer2 = V. vinifera (-)-α-terpineol syn (AAS79352), QiMyr = Quercus ilex myrcene syn (Q93X23), ClgTer = C. limon γ-terpinene syn (AAM53943), LaLim = L. angustifolia (+)-limonene syn (ABB73044), SoSab = Salvia officinalis (+)-sabinene syn (O81193), MxDFS = Malus x domestica (E,E)-α-farnesene syn (AAX19772), AabPi = A. annua (-)-β-pinene syn (AAK58723), MsLim = Mentha spicata (-)-limonene syn (AAC37366), AtMyrOc = Arabidopsis thaliana myrcene/(E)-β-ocimene syn (NP_179998), MaLin = M. aquatica (3R)-linalool syn (AAL99381), SoBDS = S. officinalis (+)-bornyl diphosphate syn (O81192), So18Cs = S. officinalis 1,8-cineole syn (O81191), LcjOs = Lotus corniculatus var. japonicus (E)-β-ocimene syn (AAT86042), ObaZin = Ocimum basilicum α-zingiberene syn (AAV63788), LatBer = L. angustifolia (E)-α-bergamotene syn (ABB73046), ObFen = O. basilicum fenchol syn (AAV63790), SlLinNer = Solanum lycopersicum (3R)-linalool/(E)-nerolidol syn (AAX69063), SlPhe = S. lycopersicum β-phellandrene/myrcene/sabinene syn (AAX69064)

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