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Figure 5 | BMC Plant Biology

Figure 5

From: Functional Annotation, Genome Organization and Phylogeny of the Grapevine (Vitis vinifera) Terpene Synthase Gene Family Based on Genome Assembly, FLcDNA Cloning, and Enzyme Assays

Figure 5

Phylogeny of the VvTPS-a subfamily. Maximum likelihood analysis of the V. vinifera TPS-a subfamily. Bootstrap values supported by ≥ 50% are designated * and those with values ≥ 80%are indicated with ^. TPS characterized in this paper are in teal and include Vv(PN & Gw)ECar# = (E)-caryophyllene syn, VvPNGerA = germacrene A syn, VvGwaBer = (E)-α-bergamotene syn, Vv(PN & Gw)GerD = germacrene D syn, VvCSaFar = (E,E)-α-farnesene syn, VvGwgCad = γ-cadinene syn, VvPNbCur = β-curcumene syn, VvPNSesq = sesquithujene syn, VvPNaZin = α-zingiberene syn, VvPNSeInt = Selina-4,11-diene/Intermedeol syn, VvPNCuCad = cubebol/δ-cadinene syn, VvPNaHum = α-humulene syn, and VvPNEb2epiCar = (E)-β-caryophyllene/2 epi-(E)-β-caryophyllene syn. VvTPS predicted from the 12-fold genome sequence assembly are in purple. Previously cloned VvTPS are in brown. TPS predicted by sequencing of the heterozygous Pinot noir are labeled with GenBank accession numbers (CAN....) or marked with ~ if they were also cloned and characterized. Abbreviations are as follows: AabCS = Artemisia annua, β-caryophyllene syn (AAL79181), VvGwGerD = Vitis vinifera (-)-germacrene D syn (AAS66357), VvCsVal = V. vinifera (+)-valencene syn (ACO36239), Aaced = A. annua 8-epi-cedrol syn (AAF80333), ScGerD = Solidago canadensis (-)-germacrene D syn (AAR31145), AaEbFar = A. annua (E)-β-farnesene syn (AAX39387), CjFarn = Citrus junos (E)-β-farnesene syn (AAK54279), LsGerA = Lactuca sativa germacrene A syn (AAM11627), LeVet = Lycopersicon esculentum vetispiradiene syn (AAG09949), GadCad = Gossypium arboreum (+)-δ-cadinene syn (O49853), PfVal = Perilla frutescens var. frutescens valencene syn (AAX16077), CsVal = C. sinensis valencene syn (AAQ04608), Nt5eAri = Nicotiana attenuata 5-epi-aristolochene syn (AAP05761), MpFar = Mentha x piperita (E)-β-farnesene syn (AAB95209).

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