Repeat | Number of repeats | Size | Start(1) | Type | % Identity | Region | Gene position | Sequence |
---|---|---|---|---|---|---|---|---|
1 | 3 | 30 | 9,345 | D | 86.67 | LSC | trnS-GCU-exon | [CA][AC]GGA[GA]AGAGAGGGATTCGAACCCTCG[AG]TA |
37,281 | D | LSC | trnS-UGA-exon | |||||
47,117 | I | LSC | trnS-GGA-exon | |||||
2 | 2 | 31 | 10,849 | D | 90.32 | LSC | trnG-UCC-exon 2 | [AT][AG]A[CA]GATGCGGGTTCGATTCCCGCTA[CT]CCGC |
38,241 | D | LSC | trnG-GCC-exon | |||||
3 | 1 | 30 | 14,401 | P | 93.33 | LSC | atpF - atpH | AAATATGAAAAATA[TC][GA]TATTTTTCATATTT |
4 | 2 | 45 | 40,451 | D | 88.89 | LSC | psaB-exon | [AT]TGCAATAGCTA[AG]ATGATG[AG]TG[TA]GCAATATCGGTCAGCCATA[AG]AC |
42,675 | D | LSC | psaA-exon | |||||
5 | 3 | 41 | 45,474 | D | 92.68 | LSC | ycf3-intron | T[CA]CAGAACCGTAC[GA]TGAGATTTTCA[TC]CTCATACGGCTCCTC |
100,797 | D | IR | rps12 - trnV-GAC | |||||
122,052 | D | SSC | ndhA-intron | |||||
6 | 2 | 31 | 56,736 | D | 90.32 | LSC | atpB - rbcL | T[AT]CTTATTCATCCACTTGAAATTTTCAA[AG][AT]T |
56,777 | I | LSC | atpB - rbcL | |||||
7 | 1 | 44 | 76,926 | P | 95.45 | LSC | psbT - psbN | TTGAAGTAATGAGCCTCCC[CA]ATAT[TG]GGGAGGCTCATTACTTCAA |
8 | 2 | 30 | 83,181 | D | 90 | LSC | rps8 - rpl14 | AATCTA[CG]T[AT][AC]TTAATCTAGTTCTTAATCTA |
83,193 | D | LSC | rps8 - rpl14 | |||||
9 | 2 | 30 | 91,385 | TR | 90 | IR | ycf2-exon | TTTCTTTTTGTC[CT]AA[GC]TCACTTC[TC]TTTTTT |
91,427 | IR | ycf2-exon | ||||||
10 | 2 | 36 | 93,791 | TR | 94.83 | IR | ycf2-exon | [AG]ATATTGATG[AC]TAGTGAC[AG]ATATTGATG[AC]TAGTGAC |
93,827 | IR | ycf2-exon | ||||||
11 | 1 | 48 | 96,252 | P | 91.67 | IR | ycf15 - trnL-CAA | AGAGCTCGGATCGAATCGGTAT[TA][TG][AC][TA]ATACCGATTCGATCCGAGCTCT |
12 | 2 | 30 | 109,623 | D | 93.33 | IR | rrn 4.5 - rrn 5 | CATTGTTCAA[AC]TCTTTGACAACA[CT]GAAAAA |
109,654 | D | IR | rrn 4.5 - rrn 5 | |||||
13 | 1 | 61 | 110,599 | P | 95.08 | IR | trnR-ACG - trnN-GCU | AGAATTCTCAGATGTACTAGCACTGCATC[AT][AT][AT]GATGCAGTGCTAGTACATCTGAGAATTCT |
14 | 1 | 36 | 118944 | P | 100 | SSC | ndhD - psaC | AAAACCCGTGCTCCAAATATTTGGAGCACGGGTTTT |