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Table 1 Abundance and length of SSR motifs identified on the olive chloroplast genome.

From: Identification of new polymorphic regions and differentiation of cultivated olives (Olea europaea L.) through plastome sequence comparison

No. of repeats*

No. of SSR

 
 

A

C

G

T

AT

GA

TA

AAAT

ATAA

GAAA

CCAAT

TAAAC

Total

3

-

-

-

-

0

0

0

0

1

1

1

1

4

4

-

-

-

-

0

0

0

1

0

0

0

0

1

5

-

-

-

-

1

1

3

0

0

0

0

0

5

6

141

20

17

161

0

1

0

0

0

0

0

0

340

7

69

8

6

57

0

0

0

0

0

0

0

0

140

8

23

2

0

33

0

0

0

0

0

0

0

0

58

9

20

0

0

19

0

0

0

0

0

0

0

0

39

10

11

1

0

14

0

0

0

0

0

0

0

0

26

11

4

0

0

9

0

0

0

0

0

0

0

0

13

12

5

0

0

7

0

0

0

0

0

0

0

0

12

13

1

0

0

2

0

0

0

0

0

0

0

0

3

14

1

0

0

0

0

0

0

0

0

0

0

0

1

15

1

0

0

0

0

0

0

0

0

0

0

0

1

16

0

0

0

1

0

0

0

0

0

0

0

0

1

Total

276

31

23

303

1

2

3

1

1

1

1

1

644

  1. SSRs analyzed for polymorphism are given in bold. * Mononucleotide SSRs with less than 6 repeats were not determined.
  2. Interspersed repeats and palindromic sequences.