Table 2 Summary of di- and tri-nucleotide repeats in H. serrata and P. carinatus unique putative transcripts
Repeat composition | No. of unique putative transcripts (relative percentage) | |
|---|---|---|
| Â | H. serrata | P. carinatus |
Dinucleotide | Â | Â |
   AC/CA/GT/TG | 301 (17.0%) | 240 (19.8%) |
   AG/GA/CT/TC | 1206 (68.3%) | 805 (66.3%) |
   AT/TA | 236 (13.4%) | 135 (11.1%) |
   CG/GC | 23 (1.3%) | 34 (2.8%) |
   Total | 1766 (100%) | 1214 (100%) |
Trinucleotide | Â | Â |
   AAC/CAA/ACA/GTT/TTG/TGT | 28 (3.9%) | 35 (11.7%) |
   AAG/GAA/AGA/CTT/TTC/TCT | 128 (17.7%) | 58 (19.4%) |
   AAT/TAA/ATA/ATT/TTA/TAT | 46 (6.4%) | 19 (6.4%) |
   ACC/CAC/CCA/GGT/GTG/TGG | 26 (3.6%) | 8 (2.7%) |
   ACG/CGA/GAC/CGT/GTC/TCG | 28 (3.9%) | 10 (3.3%) |
   ACT/CTA/TAC/AGT/TAG/GTA | 23 (3.2%) | 10 (3.3%) |
   AGC/CAG/GCA/TGC/CTG/GCT | 257 (35.6%) | 105 (35.1%) |
   AGG/GGA/GAG/TCC/CTC/CCT | 74 (10.2%) | 22 (7.4%) |
   ATC/CAT/TCA/GAT/ATG/TGA | 112 (15.5%) | 31 (10.4%) |
   CCG/CGC/GCC/GGC/GCG/CGG | 0 | 1 (0.3%) |
   Total | 722 (100%) | 299 (100%) |