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Table 1 Summary of H. serrata and P. carinatus 454-EST data

From: Comparison of 454-ESTs from Huperzia serrata and Phlegmariurus carinatus reveals putative genes involved in lycopodium alkaloid biosynthesis and developmental regulation

  H. serrata P. carinatus
Total bases 57,028,559 bp 30,498,684 bp
No. of HQ reads 140,930 79,920
Average read length 405 ±129 bp 382 ± 122 bp
No. of contigs 14,085 9,120
Average contig length 608 ± 460 bp 532 ± 380 bp
No. of contigs larger than 500 bp 8,948 (63.5%) 3,020 (33.1%)
No. of singletons 22,678 22,692
Average singleton length 351 ± 165 353 ± 132
No. of singletons above 200 bp 16,879 18,822
No. of unique putative transcripts 36,763 31,812
Annotated sequencesa 16,274 (44.3%) 14,070 (44.2%)
  1. aThe unique putative transcripts were annotated by BLASTX analysis against the NCBI nr database.