Figure 2
From: Repetitive part of the banana (Musa acuminata) genome investigated by low-depth 454 sequencing
Phylogenetic analysis of Musa retrotransposons based on RT sequences. Unrooted phylogenetic trees of Ty1/copia elements (A) and Ty3/gypsy elements (B). Names of the contigs assembled from 454 reads are printed in purple. Classification of the Ty3/gypsy lineages and chromoviral clades was done according to [30–32]. Major lineages of Ty1/copia elements were named according to a selected representative of each group.