Genome-scale identification of Soybean BURP domain-containing genes and their expression under stress treatments

BMC Plant Biology

Table 1 Summary of GmBURP family members

Gene Name	Protein Name	Locus	Intron bp	Signal peptide AA	Protein			Duplicate gene
					AA	MM	PI
BNM2
Gm06.1	Gm06.1	Glyma06g12570.1	786	None	319	35976.3	6.61	*
Gm11.1	Gm11.1	Glyma11g12670.1	476	33	300	33882.98	7.00	*
Gm11.2	Gm11.2	Glyma11g12770.1	1940	24	538	59980.87	6.26	Gm12.1
Gm11.3	Gm11.3	Glyma11g12780.1	43	None	174	19700.08	8.89	Gm12.1
Gm12.1	Gm12.1	Glyma12g04880.1	1404	24	542	59692.35	5.98	Gm11.3
USP
Gm08.1	Gm08.1	Glyma08g04080.1	297	None	133	14618.93	7.73	*
Gm08.2	Gm08.2	Glyma08g24780.1	1828	21	271	30265.01	8.07	**
Gm12.2	Gm12.2	Glyma12g34500.1	1103	19	273	30422.98	6.36	Gm13
Gm12.3	Gm12.3	Glyma12g34570.1	2394	19	277	31881.42	5.80	Gm13
Gm13	Gm13	Glyma13g35970.1	589	None	264	29416.73	6.89	Gm12.2
RD22
Gm04.2	Gm04.2	Glyma04g08410.1	3025	21	342	36992.01	6.94	Gm06.2
Gm06.2	Gm06.2	Glyma06g08540.1	2969	21	344	37209.5	7.69	Gm04.2
Gm14.1	Gm14.1	Glyma14g20440.1	1830	22	350	37982.92	6.05	**
Gm14.2	Gm14.2	Glyma14g20450.1	2006	21	368	39617.04	8.54	**
Gm18.1	Gm18.1	Glyma18g18980.1	517	22	623	67867.96	6.21	*
PG1Beta
Gm01	Gm01	Glyma01g03760.1	499	24	630	68200.03	8.75	Gm02
Gm02	Gm02	Glyma02g03960.1	443	25	629	68307.25	8.31	Gm01
Gm04.1	Gm04.1	Glyma04g35360.1	252	20	618	67759.47	9.08	Gm06.3
Gm06.3	Gm06.3	Glyma06g19480.1	690	None	614	67293.46	8.95	Gm04.1
Gm08.3	Gm08.3	Glyma08g39700.1	597	23	628	68322.61	8.38	Gm18.2
Gm18.2	Gm18.2	Glyma18g19040.1	68	None	565	61967.33	8.24	Gm08.3
BURPV
Gm04.3	Gm04.3	Glyma04g35130.1	3642	None	554	62422.49	7.23	*
Gm07	Gm07	Glyma07g28940.1	2114	21	306	34164.28	7.64	**

In Glycine max, the genes encoding BURP domain-containing proteins were named according to their loci prefixed by "Gm"
** Genes located outside of the duplicated regions
* Genes located in duplicated regions but were found only in single copy

ISSN: 1471-2229