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Table 1 Distribution of sequence data types in RoBuST

From: RoBuST: an integrated genomics resource for the root and bulb crop families Apiaceae and Alliaceae

Sequence Data Type Alliaceae Apiaceae
Structural genes 931 2732
mRNA/CDS 372 2082
Promoters 1 25
Transposons 6 56
EST 20201 2522
tRNA 99 384
rRNA 770 2252
5'UTR 23 28
Enhancer - 10
TATA signal 1 26
CAAT signal - 12
-10 signal - 1
-35 signal - 1
PolyA signal 33 37
PolyA site 14 60
Protein bind - 2
3'UTR 35 26
Repeat region 108 573
Signal peptide 26 13
Replication origin - 1
Misc feature 1250 1426
Precursor RNA - 6
Prim transcript 1 10
Mature peptide 28 22
Primer bind 62 5
Misc signal - 2
Stem loop - 1
Variation - 15
Misc RNA 262 4818
Transit peptide - 5
Mitochondrail genes 15 60
Plastid genes 328 2006
  1. Numbers of entries for major categories of Alliaceae and Apiaceae sequences are indicated.