Cluster
|
Motif
|
Putative elementa
|
Associated class of ERF (putative)b
|
% (TIC)c
|
e-value
|
---|
C100A
|
TTTCTTTG
|
JA response element-like
|
Groups VI, VIII, IX
|
81 (12.14)
|
7e-004
|
|
ACCTGATAT
|
rav1b element-like
|
Groups II, III and RAV1
|
61 (11.98)
|
4e-004
|
|
ATTTAGAG
|
JA response element-like
|
Groups VI, VIII, IX
|
60 (11.82)
|
5e-004
|
|
TATATGAA
|
JA response element-like
|
Groups VI, VIII, IX
|
51 (12.46)
|
3e-004
|
C99
|
CAAACCGA
|
DRE/CRT-like
|
Groups II, III and RAV1
|
62 (11.76)
|
1e-004
|
C99A
|
CCTTCCAT
|
CArg-box-like
|
ERF
|
61 (12.17)
|
2e-004
|
|
GGCGGCGGC
|
GCC-box-like
|
Groups I, IV, VII, X
|
60 (15.85
|
1e-004
|
C97
|
CGCCGCCG
|
GCC-box-like
|
Groups I, IV, VII, X
|
73 (14.86)
|
3e-004
|
C97A
|
TGAAACAA
|
rav1b element-like
|
Groups II, III and RAV1
|
81 (11.29)
|
2e-004
|
C94
|
TCAAAATT
|
Ethylene RE-like
|
ERF
|
58 (12.32)
|
1e-004
|
|
GCTCCGCC
|
GCC-box-like
|
Groups I, IV, VII, X
|
53 (12.92)
|
4e-004
|
|
TATATGAA
|
JA response element-like
|
Groups VI, VIII, IX
|
51 (12.59)
|
3e-004
|
|
CGCCGCCGC
|
GCC-box-like
|
Groups I, IV, VII, X
|
51 (16.05)
|
2e-004
|
C91
|
GGGCGGCT
|
GCC-box-like
|
Groups I, IV, VII, X
|
54 (12.33)
|
3e-004
|
|
CCGCCGCCG
|
GCC-box-like
|
Groups I, IV, VII, X
|
50 (16.20)
|
1e-004
|
C90A
|
CGGCGACG
|
DRE/CRT-like
|
Groups II, III and RAV1
|
66 (13.32)
|
1e-004
|
|
GCCGCCGC
|
GCC-box-like
|
Groups I, IV, VII, X
|
57 (14.28)
|
2e-004
|
C88A
|
CGGCGGCGG
|
GCC-box-like
|
Groups I, IV, VII, X
|
58 (17.37)
|
3e-005
|
|
CGGCGGCGG
|
GCC-box-like
|
Groups I, IV, VII, X
|
53 (17.37)
|
3e-005
|
|
CGCCGCCAC
|
GCC-box-like
|
Groups I, IV, VII, X
|
50 (14.54)
|
3e-004
|
C87A
|
CAAGGCCA
|
GCC-box-like
|
Groups I, IV, VII, X
|
57 (11.12)
|
4e-004
|
C86
|
CACCTTTC
|
rav1b element-like
|
Groups II, III and RAV1
|
72 (11.24)
|
1e-003
|
|
CGCCGCCGC
|
GCC-box-like
|
Groups I, IV, VII, X
|
63 (15.89)
|
9e-004
|
C86A
|
CGTCGGAA
|
DRE/CRT-like
|
Groups II, III and RAV1
|
55 (12.08)
|
5e-004
|
C83
|
GCCGCCGCC
|
GCC-box-like
|
Groups I, IV, VII, X
|
69 (16.31)
|
3e-004
|
C83A
|
GCGT(c/t) GGC
|
DRE/CRT-like
|
Groups II, III and RAV1
|
53 (12.14)
|
2e-004
|
C81
|
GAG(c/g)AGCG
|
JA response element-like
|
Groups VI, VIII, IX
|
69 (12.19)
|
4e-004
|
|
TCT(a/c)AACA
|
rav1b element-like
|
Groups II, III and RAV1
|
67 (11.43)
|
6e-004
|
|
GTGG(a/c)GAC
|
DRE/CRT-like
|
Groups II, III and RAV1
|
61 (11.73)
|
4e-004
|
|
AATTTA(g/t)AG
|
JA response element-like
|
Groups VI, VIII, IX
|
59 (12.45)
|
3e-004
|
C80
|
GGCGGCGGC
|
GCC-box-like
|
Groups I, IV, VII, X
|
60 (16.53)
|
3e-005
|
|
GAAGCCGA
|
DRE/CRT-like
|
Groups II, III and RAV1
|
53 (12.66)
|
4e-004
|
C79
|
CGCCGCCGC
|
GCC-box-like
|
Groups I, IV, VII, X
|
59 (15.76)
|
3e-004
|
|
CGGCGACG
|
DRE/CRT-like
|
Groups II, III and RAV1
|
52 (13.85)
|
4e-004
|
C78
|
CAAACCGA
|
DRE/CRT-like
|
Groups II, III and RAV1
|
62 (11.76)
|
1e-004
|
- aHomology with motifs identified in other plant species (TRANSFAC, PLACE and AGRIS databases).
- bPossible classes of associated ERF/RAV1 proteins based on recent phylogenetic classifications [37] and co-expression.
- cPercent occurrence in critical promoters relative to background sequences (Total Information Content).