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Table 6 Associations between yield-related traits and the polymorphisms of ZmGW2-CHR5

From: Relationship, evolutionary fate and function of two maize co-orthologs of rice GW2associated with kernel size and weight

Site Location Genotypea Frequency Env KWb KLb KTb HKWb Zong3/87-1c
S908 Intron 5 0/1 101/16 07BJ      1/0
     07HN      
     08HN 0.0054 0.0024    
S1601 Exon 8 A/T 22/98 07BJ      A/T
     07HN      
     08HN 0.0055 0.0018    
S1632 Exon 8 A/C 14/106 07BJ    0.0464   C/C
     07HN    0.0087   
     08HN      
S1789 3' UTR 0/17 105/15 07BJ 0.0394     17/0
     07HN      
     08HN 0.0032 0.0043    
S2051 3' flanking 0/13 27/93 07BJ      0/0
     07HN      
     08HN 0.0067    0.0363  
  1. Env, environment; HKW, one-hundred kernel weight; KL, kernel length; KT, kernel thickness; KW, kernel width; 07BJ, year 2007 Beijing; 07HN, year 2007 Hainan; 08HN, year 2008 Hainan
  2. a The numbers indicate the number of deleted nucleotides, and the letters indicate nucleotides. Numbers and letters in bold indicate the favourable alleles
  3. b Significant probabilities
  4. c The allele of inbred lines Zong3 and 87-1 which were used to develop an IF2 population for QTL mapping [40, 41]