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Table 3 Nucleotide diversity and neutrality test of ZmGW2-CHR4 and ZmGW2-CHR5

From: Relationship, evolutionary fate and function of two maize co-orthologs of rice GW2associated with kernel size and weight

Gene

Region

Na

Size (bp)b

Sc

Hd

π (× 10-3)e

Tajima's Df

ZmGW2-CHR4

5' end

116

689

22

11

7.7

0.80

 

middle

118

665

2

2

1.5

2.51*

 

3' end

115

495

5

6

1.8

-0.08

 

Total

112

1849

29

21

3.9

0.97

ZmGW2-CHR5

5' end

111

585

9

9

2.6

-0.47

 

middle

117

694

28

7

6.3

-0.51

 

3' end

120

658

12

7

3.4

0.01

 

Total

109

1937

46

19

4.2

-0.27

  1. *, P < 0.05
  2. a The number of analyzed maize inbred lines
  3. b The total number of sites (excluding sites with gaps/missing data)
  4. c The number of segregating sites (excluding InDels)
  5. d The number of haplotypes
  6. e The number of nucleotide differences per site between two randomly chosen sequences
  7. f The D value calculated according to the polymorphic sites