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Table 3 Nucleotide diversity and neutrality test of ZmGW2-CHR4 and ZmGW2-CHR5

From: Relationship, evolutionary fate and function of two maize co-orthologs of rice GW2associated with kernel size and weight

Gene Region Na Size (bp)b Sc Hd π (× 10-3)e Tajima's Df
ZmGW2-CHR4 5' end 116 689 22 11 7.7 0.80
  middle 118 665 2 2 1.5 2.51*
  3' end 115 495 5 6 1.8 -0.08
  Total 112 1849 29 21 3.9 0.97
ZmGW2-CHR5 5' end 111 585 9 9 2.6 -0.47
  middle 117 694 28 7 6.3 -0.51
  3' end 120 658 12 7 3.4 0.01
  Total 109 1937 46 19 4.2 -0.27
  1. *, P < 0.05
  2. a The number of analyzed maize inbred lines
  3. b The total number of sites (excluding sites with gaps/missing data)
  4. c The number of segregating sites (excluding InDels)
  5. d The number of haplotypes
  6. e The number of nucleotide differences per site between two randomly chosen sequences
  7. f The D value calculated according to the polymorphic sites