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Table 1 The primers of genes detected by RT-PCR and real-time PCR analyses.

From: Identification and characterization of genes associated with tapping panel dryness from Hevea brasiliensislatex using suppression subtractive hybridization

Putative Genesa(Accession No.)

RT-PCR primers (5'-3')

Real-Time PCR primers (5'-3')

WIP (GO349116)

F:GACATCGTATCATCAGGAAAAG

F: CGTATCATCAGGAAAAGTTGG

 

R: CTCTCACCTGGGTAATTATC

R: GCTAGAATCGCAGCCTTCAG

SAP (GO349117)

F: GAATACGAACCGTGAAAGCG

F: GTGGCCTATCGATCCTTTAG

 

R: CTAGGTTGAATTACCATCGC

R: ACGTCGCTATGAACGCTTGG

HSP (GO349120)

F: TTGTCCCTTAGAGCTTGTG

F: GTTGTCCCTTAGAGCTTGTG

 

R: CTCCACCAAGAGTGGTGATG

R: GACCGTGTTGTTGATTCTCC

MT (GO349141)

F: ACCAAGGCAGAACTGAAGG

F: CACCAAGGCAGAACTGAAGG

 

R: CCACTTTCTGATTCCTCCTC

R: CTGGATGTAGGATTCATCGG

CP450 (GO349147)

F: GACAAGGGGAATCCGACTG

F: CAATGTGATTTCTGCCCAGTG

 

R: CCACACGAGATTTCTGTTCTC

R: TGACGAGGCATTTGGCTACC

Cullin (GO349159)

F: GTCCAATTGGTAATGCTTAAAC

F: CCTGCTCAAGCTATCCCTTC

 

R:GGAAAGAGCCCATGAGTAAAG

R: GTCACGATTTCTGGCCAACC

UL (GO349162)

F: AGGATTAGACTTGACATAGCG

F: GATGGCCGATGGTTGAAAATG

 

R: CTCCAATTTATCAGTGCCGC

R: CTGGATCTGAGTTTGCTGTTG

PPA (GO349189)

F: GTTGAACCGGAGGAATTTCC

F: GAATCGGATTCGTGGAAGTG

 

R: TCATGGCCAGAAATGTCTCC

R: CTGTCCCTCAATCTCAAAAGG

LPH (GO349193)

F: TGTGCCACCAAGGTGCAAAC

F: GCAAGGGATCCAGGTTCATC

 

R: GTCGTGGCAAACATACGTTG

R: CACCTTATGTGCGACATCGAC

DBP (GO349205)

F: TGAACTGGAACAGAGCAAGC

F:GATGAACTGGAACAGAGCAAG

 

R: TTGACCCCGAACAATCTCAG

R: CTGTTCACGTTCTTTCAGAAC

TCTP (GO349268)

F: GCCTCCATCAGCGTTTTCAG

F: GTGTCAACAACTTGATGAACC

 

R: CCCTCAATGATATCGACACC

R: ATGAGGGTGTTGATGACCAG

SRPP (GO349270)

F: CTGAAGAGGTGGAGGAAGAG

F: CCTTTATGCCAAGGACATATC

 

R: CAGAGCTTTTGCGCCTTCCT

R: GTCTACAAACTTGACAGCCTC

AGPS (GO349278)

F: TTCTCACTCTCTCACGATGG

F: CCATACAATCTTACACTCACC

 

R: CGAGGTTCATTCCACACATC

R: CTATGTCCAGCTCGTCCTTC

HH2A (GO349279)

F: AAGAATTCCGCGGCCTCCTG

F: GAAGCCAGTTTCTAGGTCTG

 

R:ACTCGAGAACGGCAGCCAAG

R: GGCAGCCAAGTAAACTGGAG

CT (GO349296)

F: ATCCTTCTCCTGATCTCCTC

F: TTCTCCTGATCTCCTCCAAG

 

R: GGGAGCGAGAGGAAGCTAG

R: CAAACAAGAGCGTTACCTCG

GR (GO349295)

F: TGAGGCATTGAGTCTGGAAG

F: TGAGGCATTGAGTCTGGAAG

 

R: TGCTCTATTGCCTGCTCTTC

R: GAAAACTAGGTCCACAGTGG

VPSAP (GO349303)

F: ATTGTATGAGGACTCGAGATC

F: GAGGACTCGAGATCAAAGTG

 

R:AGAACTTTGCTGAGCTCTATG

R:GAAGACAAAGATGAAAGAGTGG

HbMyb1 (GO349308)

F: AGGATGAACCTGATCGATGG

F: CCAGACACCAAGTCTCCTTC

 

R: CTTCTCTCATCCTTCCCTCC

R: ATCCTTTGGCCATGCCAACC

CHP (GO349321)

F:CTCAACAACTCCAGTTGGTG

F: TCTTCAAAGCTCAACAACTCC

 

R: ACCACTTCGACATATCCTCC

R: TTGCAGGCTCTCAATTGCTC

Y17H05 (GO349330)

F:GTGATGCATGATGTGAGGAG

F: TGGTGATGCATGATGTGAGG

 

R:GAAATCCTAGGGCATCATTG

R: GTAAGACCATTGGACAAACGG

18s rRNA gene (AB268099)

F: GGTCGCAAGGCTGAAACT

F: GCTCGAAGACGATCAGATACC

 

R: ACGGGCGGTGTGTACAAA

R: TTCAGCCTTGCGACCATAC

  1. a WIP, SAP, HSP, MT, CP450, UL, PPA, LPH, DBP, TCTP, SRPP, AGPS, HH2A, CT, GR, VPSAP, HbMyb1, CHP and Y17H05 represent Wound-induced protein, Senescence-associated protein, Heat shock protein, Metacaspase type II, Cytochrome P450-like TBP protein, Ubiquitin ligase, Posphotyrosyl phosphatase activator, Latex profilin Hev b8, DNA-binding protein RAV1, Translationally controlled tumor protein, Small rubber particle protein, Alpha-1,4-glucan-protein synthase, Histone H2A, Copper transporter, Glutathione reductase, Vacuolar protein sorting-associated protein, HbMyb1 transcription factor, Conserved hypothetical protein and Hevea brasiliensis clone Y17H05 mRNA, respectively. F and R represent forward and reverse primers, respectively.