From: Coordination of the maize transcriptome by a conserved circadian clock
Biological Process | Â | Â | Â | Â | Â |
---|---|---|---|---|---|
Maize protein ID | Atgene ID | Zmphase | 1Atphase | PlantCyc Pathway | 2Function Zmto At |
Photosynthesis | |||||
GRMZM2G097457 | AT4G15530 | ZT0 | ZT22 | C4 carbon dioxide fixation | PPDK |
GRMZM2G121878 | AT5G14740 | ZT0 | ZT18 | C4 carbon dioxide fixation | CA2 |
GRMZM2G083841 | AT2G42600 | ZT20 | ZT19 | C4 carbon dioxide fixation | PEPC |
GRMZM2G105644 | AT1G74470 | ZT0 | ZT3 | Chlorophyll a/b Biosynthesis | GGR |
GRMZM2G162672 | AT3G51820 | ZT16 | ZT19 | Chlorophyll a/b Biosynthesis | CS |
GRMZM2G351977 | AT2G34420 | ZT4 | ZT5 | Photosystem II | LHCB |
GRMZM2G033885 | AT3G08940 | ZT4 | ZT4 | Photosystem II | LHCB |
GRMZM2G155216 | AT2G34420 | ZT4 | ZT5 | Photosystem II | LHCB |
GRMZM2G113033 | AT5G38410 | ZT20 | ZT19 | Calvin Cycle | RBCS-3B |
GRMZM2G162200 | AT2G39730 | ZT0 | ZT1 | Calvin Cycle | RCA |
GRMZM2G057823 | AT2G36460 | ZT0 | nc | Calvin Cycle | FBAase2 |
GRMZM2G155253 | AT4G38970 | ZT20 | ZT21 | Calvin Cycle | FBAase1 |
GRMZM2G026807 | AT5G61410 | ZT0 | ZT19 | Calvin Cycle | RPE |
GRMZM2G431708 | AT1G18270 | ZT16 | ZT7 | Calvin Cycle | KPBA |
GRMZM2G463280 | AT1G32060 | ZT16 | ZT20 | Calvin Cycle | PRK |
GRMZM2G033208 | AT3G60750 | ZT20 | ZT16 | Calvin Cycle | KETOLASE |
GRMZM2G382914 | AT1G79550 | ZT20 | ZT23 | Calvin Cycle | PGK |
GRMZM2G065928 | AT3G19270 | ZT4 | nc | Carotenoid Biosynthesis | AAH |
GRMZM2G127139 | AT5G67030 | ZT4 | ZT2 | Carotenoid Biosynthesis | ZEO |
GRMZM2G454425 | AT4G25700 | ZT20 | ZT21 | Carotenoid Biosynthesis | BCH1 |
GRMZM2G149317 | AT5G17230 | ZT20 | ZT22 | Carotenoid Biosynthesis | PSY |
GRMZM2G124455 | AT3G10920 | ZT8 | nc | Superoxide Radical Removal | MSD1 |
GRMZM2G079348 | AT1G20620 | ZT8 | ZT11 | Superoxide Radical Removal | CAT3 |
Carbohydrate Metabolism | |||||
GRMZM2G080375 | AT4G26270 | ZT0 | ZT15 | Glycolysis | PFK3 |
GRMZM2G132069 | AT4G26270 | ZT20 | ZT15 | Glycolysis | PFK3 |
GRMZM2G127717 | AT2G22480 | ZT20 | ZT5 | Glycolysis | PFK5 |
GRMZM2G051004 | AT1G16300 | ZT0 | ZT23 | Glycolysis | GADP-2 |
GRMZM2G089136 | AT1G56190 | ZT20 | ZT19 | Glycolysis | PGK |
GRMZM2G002807 | AT2G21170 | ZT16 | nc | Glycolysis | TPI |
GRMZM2G079888 | AT5G66760 | ZT0 | nc | TCA cycle | SDH1 |
GRMZM2G055331 | AT5G20280 | ZT0 | nc | Sucrose Biosynthesis | SPS1F |
GRMZM2G032003 | AT5G17310 | ZT0 | ZT0 | Sucrose Degradation | UDPase |
GRMZM2G089836 | AT1G62660 | ZT0 | nc | Sucrose Degradation | BFRUCT3 |
GRMZM2G084694 | AT1G56560 | ZT20 | nc | Sucrose Degradation | BFRUCT |
GRMZM2G391936 | AT5G19220 | ZT20 | nc | Starch Biosynthesis | AGPL1 |
GRMZM2G126988 | AT3G01180 | ZT0 | ZT2 | Starch Biosynthesis | SS2 |
GRMZM2G008263 | AT1G32900 | ZT4 | ZT1 | Starch Biosynthesis | SS |
GRMZM2G147770 | AT3G46970 | ZT12 | ZT12 | Starch Degradation | PHS2 |
AC207628.4_FGP006 | AT1G69830 | ZT16 | ZT11 | Starch Degradation | AMY3 |
Cell Wall | Â | Â | Â | Â | Â |
GRMZM2G055795 | AT4G18780 | ZT20 | nc | Cellulose Biosynthesis | IRX1 |
GRMZM2G142898 | AT5G17420 | ZT0 | nc | Cellulose Biosynthesis | IXR3 |
GRMZM2G445905 | AT5G44030 | ZT20 | nc | Cellulose Biosynthesis | CESA4 |
GRMZM2G113137 | AT5G64740 | ZT20 | ZT21 | Cellulose Biosynthesis | CESA6 |
GRMZM2G052149 | AT3G03050 | ZT20 | nc | Cellulose Biosynthesis | CSLD3 |
GRMZM2G477603 | AT1G65610 | ZT20 | ZT0 | Cellulose Metabolism | GUN7 |
GRMZM2G110735 | AT5G49720 | ZT0 | nc | Cellulose Metabolism | GUN25 |
GRMZM2G131205 | AT1G15950 | ZT0 | ZT1 | Lignin Biosynthesis | CCR1/IXR4 |
GRMZM2G110175 | AT3G19450 | ZT0 | ZT22 | Lignin Biosynthesis | CAD4 |
GRMZM2G054013 | AT1G65060 | ZT16 | ZT21 | Flavonol Biosynthesis | 4-CL3 |
Growth and Development | |||||
GRMZM2G164405 | AT4G11280 | ZT0 | nc | Ethylene Biosynthesis | ACS6 |
GRMZM2G117198 | AT3G17390 | ZT20 | nc | Ethylene Biosynthesis | MTO3 |
GRMZM2G081554 | AT4G02780 | ZT4 | nc | Gibberellin Biosynthesis | GA1 |
GRMZM2G093195 | AT2G32440 | ZT16 | ZT8 | Gibberellin Biosynthesis | KAO2 |
GRMZM2G147882 | AT1G35190 | ZT20 | ZT2 | Gibberellin Biosynthesis | OR |
GRMZM2G001457 | AT3G45780 | ZT8 | ZT7 | Blue light response | PHOT1 |
GRMZM2G067702 | AT3G46640 | ZT12 | ZT14 | Circadian Clock | LUX |
GRMZM2G095727 | AT5G02810 | ZT8 | ZT7 | Circadian Clock | PRR7 |
GRMZM2G107101 | AT1G22770 | ZT12 | ZT11 | Circadian Clock/Flowering | GI1A |
GRMZM2G149786 | AT3G13682 | ZT12 | nc | Flowering | LDL1 |
GRMZM2G065276 | AT4G16280 | ZT12 | nc | Flowering | FCA |
GRMZM2G405368 | AT5G15850 | ZT16 | ZT1 | Flowering | COL1 |