Table 1 PLD genes identified in Poplar
From: Genome-wide and molecular evolution analyses of the phospholipase D gene family in Poplar and Grape
Gene name | NCBI geneID | JGI Id | Genomic position | Gene model | Protein length | EST number | Gene family |
|---|---|---|---|---|---|---|---|
PtPLD1 | 7490921 | 1067075 | LG_I:8392741,8398030(-) | estExt_Genewise1Plus.C_LG_I2870 | 849 | 8 | C2 |
PtPLD2 | 7475119 | 829577 | LG_I:14825540..14830277(-) | estExt_fgenesh4_pm.C_LG_I0571 | 808 | 71 | C2 |
PtPLD3 | 7496896 | 550827 | LG_II:921630..926824(-) | eugene3.00020142 | 794 | 0 | C2 |
PtPLD4 | 7494030 | 755219 | LG_II:11528682,11536278(+) | fgenesh4_pg.C_LG_II001399 | 1100 | 5 | C2 |
PtPLD5 | 7480751 | 853026 | LG_III:539882,549625(-) | e_gw1.III.2315.1 | 853 | 0 | C2 |
PtPLD6 | 7485622 | 559891 | LG_V:17096700..17101855(+) | eugene3.00051506 | 836 | 4 | C2 |
PtPLD7 | 7468635 | 763496 | LG_VI:17171730,17179050(+) | fgenesh4_pg.C_LG_VI001806 | 791 | 2 | C2 |
PtPLD8 | 7477219 | 833366 | LG_X:554905,566018(-) | estExt_fgenesh4_pm.C_LG_X0035 | 1120 | 9 | PXPH |
PtPLD9 | 7478921 | 1096093 | LG_XIII:888970,894947(-) | estExt_Genewise1Plus.C_LG_XIII0313 | 1111 | 2 | PXPH |
PtPLD10 | 7496922 | 730956 | LG_XIV:1822618,1829297(+) | estExt_Genewise1_v1.C_LG_XIV0962 | 798 | 6 | C2 |
PtPLD11 | Not found | 779129 | LG_XVIII:6311823,6314468(-) | fgenesh4_pg.c_lg_xviii000497 | 516 | 3 | SP |
PtPLD12 | 7470100 | 578949 | LG_XVIII:12590250,12593859(-) | eugene3.00181173 | 808 | 0 | C2 |
PtPLD13 | 7486135 | 810176 | scaffold_44:490710..496337(-) | fgenesh4_pm.C_scaffold_44000016 | 808 | 18 | C2 |
PtPLD14 | 7486144 | 781949 | scaffold_44:928367..930598(+) | fgenesh4_pg.C_scaffold_44000079 | 759 | 1 | C2 |
PtPLD15 | 7483584 | 593768 | scaffold_57:67007..73365(+) | eugene3.00570012 | 881 | 12 | C2 |
PtPLD16 | 7480531 | 827396 | scaffold_77:955228..967889(-) | estExt_fgenesh4_pg.C_770076 | 1096 | 6 | PXPH |
PtPLD17 | 7486437 | 811801 | scaffold_181:39105..44450(+) | fgenesh4_pm.C_scaffold_181000001 | 859 | 3 | C2 |
PtPLD18* | 7485476 | 417354 | LG_VI:4395633..4397434(-) | gw1.VI.1727.1 | Â | 0 | C2 |