From: Comparative transcriptional profiling-based identification of raphanusanin-inducible genes
Familya | Genome initiative No. and Putative function | Expression ratio | Function b | |
---|---|---|---|---|
 |  | 15 min | 30 min |  |
NTRA | AT2G17420 NTRA (NADPH-dependent thioredoxin reductase 2) | 74.3 ± 11.2* | 4.18 ± 1.9 | 1 |
DRP | AT4G23690 Disease resistence response protein (DRP) | 33.7 ± 6.4* | 9.65 ± 2* | 2 |
ERECTA | ATG26330 Receptor Protein kinase ERECTA (ER) | 10.88 ± 2.3* | 15.82 ± 1* | 2 |
CCR4-NOT | AT3G44260 CCR4-NOT transcription complex protein | 4.86 ± 0.4* | 3.4 ± 0.2* | 3 |
CSN3 | AB-355980 cop9 signalosome subunit 3 | 4.2 ± 0.7* | 1.5 ± 0.3 | 4 |
Kinesin | AT2G21380 kinesin motor-protein-related | 3.93 ± 0.8* | 3.97 ± 1 | 5 |
UMP1 | AT1G67250 Proteasome maturation factor UMP1 | 3.9 ± 0.6* | 3 ± 0.4* | 4 |
ACCO | X81628.1 ACC oxidase | 3.67 ± 0.2* | 3.96 ± 1.4 | 1 |
USP | AT3G53990 Universal stress protein (USP) family protein | 1.93 ± 0.2* | 2.02 ± 0.6 | 2 |
MBP 1 | Y11482 Myrosinase binding protein MBP1 | 3.6 ± 0.5 | 5.1 ± 0.8* | 4 |
KT | AT4G19960 potassium iron transporter (KT) | 3.4 ± 0.9 | 2.24 ± 0.4* | 5 |
CAMTA 3 | AT2G22300 Calmodulin-binding transcription activator 3 (CAMTA 3) | 1.65 ± 0.2 | 2.03 ± 0.1* | 3 |
PTI1 | AT2G30740 PTI1-like protein tyrosine kinase | 2.18 ± 0.2* | 3.12 ± 0.6 | 6 |
CUL1 | AT4G02570 Cullin-like protein, a subunit of E3 ubiquitin ligase | 2.83 ± 0.4 | 1.86 ± 0.2 | 4 |
SDR | AT4G09750 short-chain dehydrogenase | 2.37 ± 0.3 | 2.2 ± 0.0.4 | 7 |
Peroxidase | AT3G32980 Heme-dependent peroxidase | 5.5 ± 0.5* | 3.43 ± 0.3* | 1 |
HSP90 | AT4G24190 SHD (SHEPHERD) HSP90 | 1.38 ± 0.3 | 1.26 ± 0.1 | 4 |
KEG | AT5G13530 RING E3 ligase protein (KEG) | 2.13 ± 0.1* | 0.8 ± 0.1 | 4 |
CIPKI | AT2G30360 SNF 1-related protein kinase | 2.19 ± 0.4 | 2.9 ± 0.38* | 6 |
GH3 | AT5G20950 Glycosyl hydrolase family 3 protein(GH3) | 2.1 ± 0.3 | 1.4 ± 0.1 | 7 |
CESA5 | AT5G09870 Cellulose synthase 5- transferase | 1.5 ± 0.1 | 1.95 ± 0.1* | 5 |
CAT2 | AF139538 Catalase2 | 1.97 ± 0.2* | 1.6 ± 0.3 | 1 |
Glycoprotein | AT1G14710 Hydroxy proline rich glycoprotein family | 1.88 ± 0.2* | 0.9 ± 0.1 | 10 |
POT | AT3G16180 Proton-dependent oligopeptide transport (POT) family protein | 1.82 ± 0.1* | 1.05 ± 0.1 | 5 |
LRT | AT2G31880 Leucine-rich repeat tranmemberane protein kinase | 1.91 ± 0.5 | 1.7 ± 0.2 | 6 |
Clathrin | AT1G60780 Clathrin adaptor complexs medium subunit family protein | 1.8 ± 0.14* | 1.2 ± 0.1 | 5 |
PKC | AY835401.1 Protein Kinase C conserved region 2 | 1.7 ± 0.2 | 0.38 ± 0.1* | 6 |
Pescadillo | AT5G14520 Pescadillo-related protein | 1.7 ± 0.2 | 2.12 ± 0.4 | 3 |
3KCS4 | AT1G19440 Very long-chain fatty acid condensing enzyme | 1.6 ± 0.1 | 1.5 ± 0.2 | 5 |
Profilin | AT2G19760 Profilin1 | 1.59 ± 0.1 | 2.23 ± 0.1* | 9 |
Dehydrin | AT2G39750 Dehydration-responsive family protein | 1.67 ± 0.2 | 1.8 ± 0.3 | 10 |
PGβ1 | AT1G70370 Polygalacturonase isoenzyme 1 beta subunit homolog | 1.56 ± 0.2 | 1.44 ± 0.2 | 10 |
MAK | AT5G45430 serine/threonine-protein kinase Mak | 1.6 ± 0.3 | 1.25 ± 0.1 | 6 |
3PGDH | AT1G17745 3-phosphoglycerate dehydrogenase | 1.65 ± 0.1* | 1.8 ± 0.2 | 7 |
Ring Finger | AT3G09760 C3HC4-type Ring Finger | 1.55 ± 0.2 | 1.92 ± 0.1* | 4 |
G6PDH | AT5G35790 Glucose 6 -phosphate dehydrogenase | 0.69 ± 0.1 | 1.6 ± 0.2 | 7 |
GTPase | AT5G53570 Gtpase activator protein for Rab-like GTPase-like protein | 1.5 ± 0.1 | 2 ± 0.2 | 2 |
UBQ3 | At5g03240 UBQ3 | 1.4 ± 0.1 | 2.35 ± 0.2* | 4 |
CND41 | AT3G18490 aspartyl protease family protein | 1.3 ± 0.1 | 0.01 ± 0.1* | 4 |
MetE | AT5G17920 Cobalamin-independent methionine synthase | 1.4 ± 0.1 | 1.13 ± 0.1 | 4 |
RALF | AT3G16570 Rapid Alkalization Factor 23 (RALF23) | 1.31 ± 0.2 | 2.3 ± 0.4 | 2 |
PPEase | AT2G26870 Phosphoesterase family protein | 1.3 ± 0.1 | 1.3 ± 0.1 | 7 |
CPOX | AF375424 Coproporphyrinogen III oxidase | 1.3 ± 0.1 | 1.45 ± 0.1 | 1 |
BURP | AT1G70370 Polygalacturonase isoenzyme 1 beta subunit homolog | 1.3 ± 0.1 | 1.1 ± 0.1 | 10 |
GASA4 | AT5G15230 GASA4 (GAST1 protein homolog) | 1.27 ± 0.2 | 3.1 ± 0.7 | 10 |
PLC | AAD26119.1 Phosphoinositide- specific phospholipase C | 1.23 ± 0.1 | 1.78 ± 0.2 | 2 |
MAG2 | AT3G47700 MAG2(chromosome structure maintenance protein-related) | 1.2 ± 0.1 | 1.7 ± 0.1* | 5 |
GTF | AT1G19710 Glycosyl transferase family 1 protein | 1.07 ± 0.1 | 1.95 ± 0.1* | 5 |
RMB2 | AB042187 Myrosinase (RMB2) | 0.45 ± 0.1 | 1.66 ± 0.1* | 7 |
RMB1 | AB04218 Myrosinase (RMB1) | 0.52 ± 0.1 | 1.52 ± 0.2 | 7 |